Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 1.4e-129 467.2 266 100.0
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 2.7e-91 340.1 274 73.4
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 1.0e-90 338.2 273 76.2
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 1.4e-87 327.8 267 72.7
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 1.3e-74 284.6 278 57.9
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 1.3e-74 284.6 276 56.5
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 1.9e-73 280.8 278 57.9
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 1.8e-71 274.2 270 59.3
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 6.8e-71 272.3 268 54.5
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 5.8e-70 269.2 269 56.5
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.7e-69 267.7 264 54.9
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.7e-69 266.5 272 59.6
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 5.4e-68 262.7 276 57.6
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.7e-66 257.7 272 54.8
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 9.6e-65 251.9 274 50.0
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 1.2e-64 251.5 277 54.5
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 8.1e-64 248.8 264 55.3
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 2.0e-62 244.2 262 53.4
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 4.4e-62 243.0 272 49.3
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 5.8e-62 242.7 271 50.2
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 9.9e-62 241.9 269 55.8
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.7e-61 241.1 277 49.5
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 1.9e-60 237.7 276 48.2
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 2.4e-60 237.3 279 48.7
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 7.8e-59 232.3 273 48.4
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 2.3e-58 230.7 267 50.9
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 3.0e-58 230.3 269 55.4
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 5.1e-58 229.6 270 54.1
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 6.6e-58 229.2 268 51.1
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 4.3e-57 226.5 267 45.7
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 1.3e-56 224.9 266 49.6
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 1.6e-56 224.6 277 51.3
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 3.6e-56 223.4 270 45.2
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 4.8e-56 223.0 270 44.8
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 1.1e-55 221.9 267 45.7
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 3.1e-55 220.3 272 48.5
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 5.3e-55 219.5 265 45.7
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 5.3e-55 219.5 267 44.9
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.5e-54 218.0 265 44.9
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 2.6e-54 217.2 271 44.6
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 4.4e-54 216.5 267 47.6
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.7e-53 214.5 266 45.5
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 2.2e-53 214.2 209 52.6
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 2.9e-53 213.8 265 44.2
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 2.9e-53 213.8 234 53.0
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 1.9e-52 211.1 209 53.1
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 3.2e-52 210.3 277 43.0
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 3.2e-52 210.3 240 49.6
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 1.6e-51 208.0 270 44.4
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 2.7e-51 207.2 270 45.9
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 1.0e-50 205.3 269 45.4
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 5.1e-50 203.0 266 43.2
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 1.4e-47 194.9 266 43.2
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 6.9e-47 192.6 236 43.2
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 6.9e-47 192.6 268 48.9
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 4.9e-45 186.4 269 47.6
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 8.4e-45 185.7 234 47.4
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 1.2e-43 181.8 274 45.6
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 4.6e-43 179.9 176 52.3
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 3.9e-42 176.8 284 44.7
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 5.1e-42 176.4 208 46.6
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 6.7e-42 176.0 226 45.6
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 6.7e-42 176.0 270 40.7
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 5.6e-41 172.9 267 49.4
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.6e-40 171.4 240 42.5
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 1.4e-39 168.3 234 41.0
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 4.0e-39 166.8 201 45.8
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 5.3e-39 166.4 154 53.9
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 7.6e-38 162.5 151 60.3
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 7.6e-38 162.5 279 38.4
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 3.8e-37 160.2 155 60.6
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 6.5e-37 159.5 155 60.0
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 3.2e-36 157.1 192 49.0
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 7.1e-36 156.0 192 47.9
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 6.0e-35 152.9 234 38.5
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 1.0e-34 152.1 154 58.4
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 4.3e-33 146.7 213 40.8
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 1.1e-31 142.1 208 41.3
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 5.3e-31 139.8 229 39.3
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 1.2e-30 138.7 266 38.7
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.3e-29 135.2 197 43.1
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.9e-28 131.3 198 40.9
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 3.0e-26 124.0 194 46.4
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 1.1e-25 122.1 214 37.9
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 3.1e-23 114.0 108 50.0
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 9.0e-23 112.5 117 52.1
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 2.2e-21 107.8 112 46.4
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 5.1e-18 96.7 176 31.2
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.6e-14 84.3 120 42.5
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 8.8e-10 69.3 144 28.5
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.5e-09 68.6 138 29.7
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 2.0e-09 68.2 81 40.7
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.6e-09 67.8 144 27.1
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.6e-09 67.8 181 24.9
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 2.6e-09 67.8 174 29.9
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 7.4e-09 66.2 174 29.9
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.7e-08 65.1 177 28.2
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 7.0e-07 59.7 255 22.7
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 2.0e-06 58.2 146 26.0
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 2.6e-06 57.8 109 27.5
Lalb_Chr19g0137401 Lupinus albus HOM05D007402 ORTHO05D003673 4.5e-06 57.0 144 24.3
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 7.7e-06 56.2 152 26.3
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 7.7e-06 56.2 194 24.2


User provided reference genes

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