Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g113670 Medicago truncatula HOM05D011022 ORTHO05D013222 9.1e-184 646.7 318 100.0
Phvul.006G093000 Phaseolus vulgaris HOM05D011022 ORTHO05D013222 7.4e-61 238.4 176 67.6
VMungo0540G1277 Vigna mungo HOM05D011022 ORTHO05D013222 3.7e-60 236.1 176 68.8
Glyma.03G239100 Glycine max HOM05D011022 ORTHO05D013222 1.4e-59 234.2 177 67.2
Lj1g0012653 Lotus japonicus HOM05D011022 ORTHO05D013222 8.5e-57 224.9 162 66.7
Lj1g0000773 Lotus japonicus HOM05D011022 ORTHO05D013222 8.0e-55 218.4 161 65.8
arahy.Tifrunner.gnm1.ann1.PBV359 Arachis hypogaea HOM05D011022 ORTHO05D013222 6.3e-44 182.2 173 54.3
FAN14G4161 Fragaria x ananassa HOM05D011022 ORTHO05D013222 5.3e-43 179.1 160 54.4
Haze_04210 Corylus avellana HOM05D000091 ORTHO05D009985 1.2e-42 177.9 162 54.9
Potri.013G024350 Populus trichocarpa HOM05D011022 ORTHO05D013222 3.0e-38 163.3 165 47.9
MELO3C015330.2 Cucumis melo HOM05D011022 ORTHO05D013222 2.8e-36 156.8 157 51.6
ClCG03G016890 Citrullus lanatus HOM05D000091 ORTHO05D009985 4.8e-36 156.0 157 51.6
CsaV3_1G039040 Cucumis sativus L. HOM05D011022 ORTHO05D013222 7.0e-35 152.1 160 50.0
Sed0021357 Sechium edule HOM05D011022 ORTHO05D013222 1.6e-34 151.0 157 50.3
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 1.7e-33 147.5 204 40.2
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 1.1e-32 144.8 173 45.1
TPR.G31710 Trifolium pratense HOM05D011022 ORTHO05D013222 1.2e-31 141.4 134 53.7
Manes.14G049350 Manihot esculenta HOM05D011022 ORTHO05D013222 1.0e-30 138.3 146 45.9
TWI12G0851 Tripterygium wilfordii HOM05D011022 ORTHO05D013222 3.4e-29 133.3 160 42.5
FvH4_6g24123 Fragaria vesca HOM05D011022 ORTHO05D013222 4.1e-27 126.3 160 43.8
FAN09G3448 Fragaria x ananassa HOM05D011022 ORTHO05D013222 2.9e-25 120.2 91 59.3
Medtr4g056240 Medicago truncatula HOM05D008558 ORTHO05D011658 3.4e-21 106.7 72 68.1
Medtr6g036830 Medicago truncatula HOM05D008558 ORTHO05D011658 4.3e-16 89.7 95 48.4
Medtr2g056170 Medicago truncatula HOM05D008558 ORTHO05D011658 2.8e-15 87.0 77 51.9
Medtr6g039210 Medicago truncatula HOM05D008558 ORTHO05D011658 8.0e-15 85.5 87 50.6
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 1.8e-14 84.3 123 46.3
Medtr0406s0010 Medicago truncatula HOM05D039479 ORTHO05D011658 2.6e-13 80.5 85 44.7
Psat1g145400 Pisum sativum HOM05D024016 ORTHO05D030478 3.4e-13 80.1 70 55.7
Medtr3g067565 Medicago truncatula HOM05D008558 ORTHO05D011658 1.7e-12 77.8 132 37.9
Medtr5g054740 Medicago truncatula HOM05D008558 ORTHO05D011658 2.2e-12 77.4 139 37.4
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 8.3e-12 75.5 111 41.4
Medtr6g052740 Medicago truncatula HOM05D008558 ORTHO05D011658 1.9e-11 74.3 95 44.2
Medtr2g450410 Medicago truncatula HOM05D008558 ORTHO05D011658 1.6e-10 71.2 176 30.7
Medtr6g033695 Medicago truncatula HOM05D008558 ORTHO05D011658 2.1e-10 70.9 110 38.2
Medtr5g049880 Medicago truncatula HOM05D039929 ORTHO05D011658 4.6e-10 69.7 65 50.8
Medtr6g045577 Medicago truncatula HOM05D039929 ORTHO05D011658 4.6e-10 69.7 65 50.8
Medtr0347s0040 Medicago truncatula HOM05D008558 ORTHO05D011658 6.0e-10 69.3 122 42.6
Medtr1g062580 Medicago truncatula HOM05D008558 ORTHO05D011658 1.0e-09 68.6 113 34.5
Medtr7g050780 Medicago truncatula HOM05D008558 ORTHO05D011658 3.9e-09 66.6 73 46.6
Medtr6g453110 Medicago truncatula HOM05D008558 ORTHO05D011658 1.9e-08 64.3 78 44.9
Medtr0242s0010 Medicago truncatula HOM05D008558 ORTHO05D011658 4.3e-08 63.2 81 43.2
Medtr1148s0010 Medicago truncatula HOM05D008558 ORTHO05D001516 4.3e-08 63.2 103 38.8
Medtr4g044667 Medicago truncatula HOM05D000743 ORTHO05D011658 7.3e-08 62.4 77 41.6
Medtr1g035030 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-07 60.5 160 33.1
Medtr3g464880 Medicago truncatula HOM05D008558 ORTHO05D011658 3.6e-07 60.1 65 43.1
Psat5g122080 Pisum sativum HOM05D024016 ORTHO05D030478 2.3e-06 57.4 102 38.2
Medtr5g073130 Medicago truncatula HOM05D008558 ORTHO05D001516 3.1e-06 57.0 75 44.0
Medtr6g033770 Medicago truncatula HOM05D008558 ORTHO05D011658 4.0e-06 56.6 109 37.6


User provided reference genes

Program Settings