Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g099600 Medicago truncatula HOM05D000448 ORTHO05D000291 2.0e-40 168.7 89 100.0
TPR.G7561 Trifolium pratense HOM05D000448 ORTHO05D000291 7.0e-33 143.7 87 88.5
Lj1g0011572 Lotus japonicus HOM05D000448 ORTHO05D000291 5.2e-28 127.5 87 73.6
Medtr7g099570 Medicago truncatula HOM05D000448 ORTHO05D000291 6.7e-28 127.1 87 73.6
TPR.G7562 Trifolium pratense HOM05D000448 ORTHO05D000291 1.3e-26 122.9 87 72.4
VMungo1383G2601 Vigna mungo HOM05D000448 ORTHO05D000291 1.1e-25 119.8 85 72.9
Glyma.03G170400 Glycine max HOM05D000448 ORTHO05D000291 4.1e-25 117.9 89 68.5
arahy.Tifrunner.gnm1.ann1.27XKAM Arachis hypogaea HOM05D000448 ORTHO05D000291 1.9e-22 109.0 85 62.4
arahy.Tifrunner.gnm1.ann1.9J7SPP Arachis hypogaea HOM05D000448 ORTHO05D000291 1.9e-22 109.0 85 62.4
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 3.2e-22 108.2 85 64.7
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 9.4e-22 106.7 85 64.7
Lj1g0015920 Lotus japonicus HOM05D000448 ORTHO05D000291 2.7e-21 105.1 87 59.8
Lalb_Chr25g0289651 Lupinus albus HOM05D000448 ORTHO05D000291 6.1e-21 104.0 87 60.9
Psat3g049960 Pisum sativum HOM05D000448 ORTHO05D012127 2.3e-20 102.1 85 60.0
TPR.G7563 Trifolium pratense HOM05D000448 ORTHO05D000291 7.5e-19 97.1 87 58.6
Glyma.13G130300 Glycine max HOM05D000448 ORTHO05D000291 9.5e-14 80.1 87 51.7
Medtr1g069110 Medicago truncatula HOM05D000448 ORTHO05D000291 2.1e-13 79.0 88 53.4
Glyma.10G042950 Glycine max HOM05D000448 ORTHO05D000291 2.8e-13 78.6 87 51.7
Cfa007125 Carpinus fangiana HOM05D000448 ORTHO05D000291 2.0e-11 72.4 87 44.8
Cfa013308 Carpinus fangiana HOM05D000448 ORTHO05D000291 3.7e-10 68.2 89 44.9
VMungo1383G3639 Vigna mungo HOM05D000448 ORTHO05D000291 7.0e-09 63.9 87 40.2
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.3e-07 59.7 85 44.7
Phvul.007G156400 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 5.0e-07 57.8 85 37.6
MD12G1213300 Malus domestica HOM05D000448 ORTHO05D000291 8.6e-07 57.0 88 46.6
Medtr7g099560 Medicago truncatula HOM05D000448 ORTHO05D000291 1.1e-06 56.6 57 49.1
CANSAT56G2866 Cannabis sativa HOM05D000448 ORTHO05D000291 2.5e-06 55.5 89 36.0
COL.COLO4_00210 Corchorus olitorius HOM05D000448 ORTHO05D000291 3.3e-06 55.1 76 36.8
CANSAT11G0836 Cannabis sativa HOM05D000448 ORTHO05D000291 5.6e-06 54.3 88 31.8
Psat6g065480 Pisum sativum HOM05D000448 ORTHO05D000291 7.3e-06 53.9 63 49.2
Prupe.3G155100 Prunus persica HOM05D000448 ORTHO05D000291 7.3e-06 53.9 90 40.0
COL.COLO4_35168 Corchorus olitorius HOM05D000448 ORTHO05D000291 9.5e-06 53.5 85 37.6
Eucgr.L00439 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.5e-06 53.5 59 49.2
Prupe.3G155300 Prunus persica HOM05D000264 ORTHO05D000152 9.5e-06 53.5 90 34.4


User provided reference genes

Program Settings