Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g099550 Medicago truncatula HOM05D000448 ORTHO05D000291 7.2e-125 450.7 240 100.0
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 1.2e-23 114.4 105 70.5
Haze_18775 Corylus avellana HOM05D000448 ORTHO05D000291 1.7e-17 94.0 106 61.3
Ca_08772_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 6.5e-17 92.0 105 61.9
Medtr7g099580 Medicago truncatula HOM05D000448 ORTHO05D000313 2.5e-16 90.1 109 45.9
Haze_18750 Corylus avellana HOM05D000448 ORTHO05D000291 7.2e-16 88.6 104 60.6
TPR.G7558 Trifolium pratense HOM05D000448 ORTHO05D000291 1.8e-14 84.0 104 59.6
Haze_18751 Corylus avellana HOM05D000448 ORTHO05D000291 3.9e-14 82.8 100 61.0
Haze_18768 Corylus avellana HOM05D000448 ORTHO05D000291 5.1e-14 82.4 97 61.9
Cfa021311 Carpinus fangiana HOM05D000448 ORTHO05D000291 3.3e-13 79.7 97 57.7
Cfa019716 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.3e-12 77.8 96 43.8
TPR.G29735 Trifolium pratense HOM05D000448 ORTHO05D000291 6.3e-12 75.5 97 57.7
Glyma.13G202000 Glycine max HOM05D000448 ORTHO05D000291 9.1e-11 71.6 98 58.2
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.2e-10 71.2 112 48.2
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 4.5e-10 69.3 106 43.4
Cpa.g.sc277.6 Carica papaya HOM05D000448 ORTHO05D000291 4.5e-10 69.3 102 50.0
Atru.chr7.1876 Acer truncatum HOM05D000448 ORTHO05D000291 7.7e-10 68.6 101 37.6
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.0e-09 68.2 105 51.4
CsaV3_6G032090 Cucumis sativus L. HOM05D039891 ORTHO05D000291 1.7e-09 67.4 100 52.0
Sc23g0005330 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.9e-09 66.6 108 47.2
Psat3g049960 Pisum sativum HOM05D000448 ORTHO05D012127 5.0e-09 65.9 45 64.4
RcHm_v2.0_Chr1g0342341 Rosa chinensis HOM05D000448 ORTHO05D000291 8.5e-09 65.1 102 42.2
Cc02_g31560 Coffea canephora HOM05D000448 ORTHO05D000291 1.9e-08 63.9 90 51.1
Hma1.2p1_0231F.1_g097550 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.9e-08 63.9 97 50.5
Sc23g0005320 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.9e-08 63.9 134 44.0
PSO063G6971 Papaver somniferum HOM05D000480 ORTHO05D000313 3.2e-08 63.2 111 35.1
TPR.G473 Trifolium pratense HOM05D000448 ORTHO05D000291 3.2e-08 63.2 33 84.8
Ah.16g105930 Amaranthus hybridus HOM05D000448 ORTHO05D000291 4.2e-08 62.8 94 47.9
SalBow3G2035 Salvia bowleyana HOM05D000448 ORTHO05D000291 4.2e-08 62.8 99 34.3
Cc08_g01420 Coffea canephora HOM05D000448 ORTHO05D000291 7.2e-08 62.0 89 51.7
PSO478G0673 Papaver somniferum HOM05D000448 ORTHO05D000291 7.2e-08 62.0 97 47.4
AUR62008893 Chenopodium quinoa HOM05D000448 ORTHO05D000313 1.2e-07 61.2 100 34.0
CANSAT25G3158 Cannabis sativa HOM05D000448 ORTHO05D000291 1.6e-07 60.8 117 40.2
Lj1g0011572 Lotus japonicus HOM05D000448 ORTHO05D000291 1.6e-07 60.8 39 71.8
PGSC0003DMG400031159 Solanum tuberosum HOM05D000480 ORTHO05D000313 2.1e-07 60.5 99 34.3
Psat6g065480 Pisum sativum HOM05D000448 ORTHO05D000291 2.7e-07 60.1 45 60.0
Cpa.g.sc277.5 Carica papaya HOM05D000448 ORTHO05D000291 3.6e-07 59.7 102 46.1
Haze_18777 Corylus avellana HOM05D000448 ORTHO05D000291 4.7e-07 59.3 158 39.2
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 6.1e-07 58.9 96 35.4
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 6.1e-07 58.9 101 47.5
Phvul.007G156400 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 8.0e-07 58.5 155 36.8
vmacro03790 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.0e-07 58.5 100 31.0
Eucgr.C03587 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.4e-06 57.8 114 33.3
Haze_18779 Corylus avellana HOM05D000448 ORTHO05D000291 1.8e-06 57.4 158 39.9
Eucgr.C03399 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.3e-06 57.0 98 34.7
MELO3C013066.2 Cucumis melo HOM05D000448 ORTHO05D000291 3.0e-06 56.6 99 35.4
vmacro21869 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.0e-06 56.6 148 38.5
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 5.2e-06 55.8 97 48.5


User provided reference genes

Program Settings