Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.7e-174 617.5 312 100.0
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 2.0e-90 338.2 279 65.9
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 6.4e-81 306.6 282 59.6
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 2.8e-76 291.2 272 57.7
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 3.5e-71 274.2 297 52.5
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 9.5e-69 266.2 251 56.2
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.2e-68 265.8 271 52.0
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.6e-68 264.2 177 71.2
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.6e-68 264.2 177 71.2
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 5.4e-64 250.4 235 54.9
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 1.6e-63 248.8 298 48.0
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 3.5e-63 247.7 259 52.5
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 3.5e-63 247.7 261 51.0
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 5.1e-62 243.8 252 53.6
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.9e-61 241.9 260 50.8
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 4.3e-61 240.7 247 50.6
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 9.6e-61 239.6 260 50.0
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 4.7e-60 237.3 259 50.2
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 2.4e-59 235.0 257 48.6
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 5.2e-59 233.8 238 52.1
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 6.9e-59 233.4 256 51.6
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 8.9e-59 233.0 274 49.3
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 4.4e-58 230.7 235 51.1
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 5.8e-58 230.3 275 46.2
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.3e-57 229.2 270 48.9
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 1.1e-56 226.1 240 50.4
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 3.2e-56 224.6 247 47.8
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 4.2e-56 224.2 247 47.4
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 5.4e-56 223.8 240 48.8
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 7.1e-56 223.4 235 51.1
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.6e-55 222.2 252 46.8
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 1.6e-55 222.2 242 48.8
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 6.6e-54 216.9 246 46.3
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 3.3e-53 214.5 246 49.2
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 3.3e-53 214.5 244 46.7
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 3.3e-53 214.5 244 46.7
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 7.3e-53 213.4 248 47.6
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.3e-52 212.6 295 43.1
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.6e-52 212.2 260 45.8
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.6e-52 211.1 175 57.7
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 3.6e-52 211.1 200 53.5
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.1e-52 209.9 174 58.6
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 8.1e-52 209.9 175 60.0
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 4.0e-51 207.6 175 57.1
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 3.8e-49 201.1 175 54.3
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 8.4e-49 199.9 257 42.4
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 1.1e-48 199.5 175 55.4
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.9e-48 198.7 220 46.8
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.9e-48 198.7 175 55.4
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 1.6e-47 195.7 175 53.1
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.1e-47 195.3 175 53.7
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 1.0e-46 193.0 175 53.1
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 6.7e-46 190.3 130 64.6
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.5e-45 189.1 250 45.2
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 2.5e-45 188.3 272 43.0
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 2.5e-45 188.3 175 53.1
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 3.3e-45 188.0 105 82.9
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 9.6e-45 186.4 255 42.7
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 8.1e-44 183.3 173 49.7
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.8e-43 182.2 180 51.1
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 2.4e-43 181.8 175 51.4
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 2.4e-43 181.8 244 43.4
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 5.3e-43 180.6 171 52.6
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 3.4e-42 177.9 231 42.0
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 6.4e-41 173.7 191 50.8
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 8.4e-41 173.3 247 44.1
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 9.3e-40 169.9 289 36.7
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.6e-39 169.1 302 36.8
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 7.9e-39 166.8 182 48.9
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 6.9e-35 153.7 107 67.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 1.7e-33 149.1 256 38.7
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 4.2e-32 144.4 134 50.7
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 5.5e-32 144.1 208 40.4
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 1.6e-31 142.5 240 38.8
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 6.0e-31 140.6 252 36.5
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 7.9e-31 140.2 107 61.7
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 7.9e-31 140.2 186 45.7
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 7.9e-31 140.2 252 36.9
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 1.1e-29 136.3 126 52.4
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 2.2e-28 132.1 147 49.7
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.5e-26 125.9 148 43.9
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.8e-22 112.5 81 61.7
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 8.7e-22 110.2 81 59.3
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 4.8e-20 104.4 81 59.3
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 1.4e-19 102.8 83 54.2
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 2.4e-19 102.1 86 53.5
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 3.1e-19 101.7 116 43.1
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.0e-18 99.0 82 57.3
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 2.0e-18 99.0 83 55.4
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 1.7e-17 95.9 83 55.4
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 5.5e-16 90.9 243 31.3
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 9.4e-16 90.1 70 55.7
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.2e-12 79.0 176 33.0
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 1.0e-09 70.1 188 28.7
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 2.5e-08 65.5 91 36.3
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 5.5e-08 64.3 54 55.6
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 9.4e-08 63.5 91 35.2
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 1.2e-07 63.2 143 25.2
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 1.6e-07 62.8 91 34.1
Cc02_g04950 Coffea canephora HOM05D000104 ORTHO05D009920 4.7e-07 61.2 91 36.3
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 6.1e-07 60.8 219 25.1
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 8.0e-07 60.5 69 40.6
Sopen03g025210 Solanum pennellii HOM05D000104 ORTHO05D009920 8.0e-07 60.5 91 34.1
Solyc03g095200.1 Solanum lycopersicum HOM05D000104 ORTHO05D009920 1.0e-06 60.1 91 34.1
Medtr5g031740 Medicago truncatula HOM05D003210 ORTHO05D000001 3.0e-06 58.5 133 30.1
SEGI_19561 Sequoiadendron giganteum HOM05D007496 ORTHO05D009431 3.0e-06 58.5 86 30.2
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 5.2e-06 57.8 288 23.6
Lj2g0010731 Lotus japonicus HOM05D003210 ORTHO05D000001 8.8e-06 57.0 152 27.0
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 8.8e-06 57.0 165 24.2


User provided reference genes

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