Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 3.5e-74 281.6 144 100.0
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.8e-54 216.1 132 85.6
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 8.9e-54 213.8 143 82.5
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 4.9e-52 208.0 133 83.5
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 5.8e-45 184.5 135 77.0
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.9e-44 182.2 139 74.1
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.7e-41 172.9 129 76.0
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.3e-41 172.6 121 77.7
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.6e-41 171.0 144 71.5
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 6.6e-41 171.0 134 71.6
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 1.1e-40 170.2 121 76.9
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.7e-39 164.9 136 69.1
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 6.2e-39 164.5 113 77.9
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 6.0e-34 147.9 133 62.4
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 6.6e-33 144.4 134 59.7
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 1.4e-30 136.7 127 62.2
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.8e-30 136.3 143 56.6
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 5.2e-30 134.8 114 63.2
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 7.6e-29 131.0 125 56.0
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.3e-28 130.2 128 57.0
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 2.2e-28 129.4 125 54.4
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 8.4e-28 127.5 104 68.3
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.1e-27 127.1 133 56.4
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.4e-27 126.7 121 58.7
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.9e-27 126.3 127 57.5
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 4.1e-27 125.2 70 85.7
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.1e-27 125.2 70 85.7
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.1e-27 125.2 70 85.7
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 7.1e-27 124.4 130 53.8
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.2e-27 124.0 70 85.7
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 9.2e-27 124.0 131 55.7
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.2e-26 123.6 112 58.0
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.2e-26 123.6 117 59.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.2e-26 123.6 127 55.9
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.6e-26 123.2 108 62.0
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.7e-26 122.5 90 70.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 3.5e-26 122.1 131 55.0
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 3.5e-26 122.1 134 53.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 7.8e-26 120.9 86 73.3
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 7.8e-26 120.9 86 73.3
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.3e-25 120.2 130 54.6
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.3e-25 119.4 112 56.2
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.3e-25 119.4 70 82.9
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 5.1e-25 118.2 131 54.2
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 8.7e-25 117.5 124 53.2
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 8.7e-25 117.5 125 56.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 8.7e-25 117.5 131 57.3
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.1e-24 117.1 72 80.6
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.9e-24 116.3 77 76.6
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.5e-24 115.9 107 58.9
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 2.5e-24 115.9 129 51.2
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.5e-24 115.9 127 53.5
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 2.5e-24 115.9 135 51.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.3e-24 115.5 88 70.5
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 4.3e-24 115.2 91 68.1
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 7.3e-24 114.4 126 56.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.2e-23 113.6 97 62.9
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.6e-23 113.2 86 67.4
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 2.1e-23 112.8 117 53.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.1e-23 112.8 131 53.4
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.1e-23 112.8 71 78.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 3.6e-23 112.1 68 77.9
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 8.1e-23 110.9 93 65.6
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.1e-22 109.0 79 67.1
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 9.0e-22 107.5 121 53.7
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 9.0e-22 107.5 137 48.2
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 9.0e-22 107.5 118 55.1
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.2e-21 107.1 132 50.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 1.5e-21 106.7 124 52.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 2.0e-21 106.3 131 49.6
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.6e-21 105.9 90 66.7
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 3.4e-21 105.5 64 78.1
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 4.4e-21 105.1 68 76.5
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 5.8e-21 104.8 131 48.9
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 5.8e-21 104.8 93 59.1
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 7.6e-21 104.4 74 70.3
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.3e-20 103.6 93 63.4
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.3e-20 103.6 142 47.2
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.3e-20 103.6 100 55.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.7e-20 103.2 90 62.2
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.7e-20 103.2 92 59.8
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.7e-20 103.2 92 59.8
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.9e-20 102.4 107 57.0
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.9e-20 102.4 110 52.7
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.9e-20 101.7 59 79.7
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 4.9e-20 101.7 105 58.1
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 4.9e-20 101.7 94 56.4
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 6.4e-20 101.3 135 47.4
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 8.4e-20 100.9 94 56.4
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.1e-19 100.5 94 56.4
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.4e-19 99.4 94 54.3
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.2e-19 99.0 123 46.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 3.2e-19 99.0 87 57.5
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 4.2e-19 98.6 111 52.3
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 9.3e-19 97.4 123 45.5
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.3e-17 93.6 67 68.7
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 3.0e-17 92.4 81 58.0
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 5.1e-17 91.7 66 66.7
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.1e-16 90.5 82 59.8
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.1e-16 90.5 82 59.8
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.9e-16 89.7 86 58.1
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 4.3e-16 88.6 120 45.8
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.8e-15 85.9 119 43.7
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.0e-14 82.0 66 69.7
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.3e-14 81.6 89 49.4
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.8e-13 78.2 69 62.3
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.3e-12 77.0 64 57.8
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.3e-08 62.4 98 44.9
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.3e-08 62.4 91 45.1


User provided reference genes

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