Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 1.8e-31 138.7 73 100.0
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 5.5e-28 127.1 71 90.1
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 3.6e-27 124.4 71 87.3
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.7e-21 105.5 72 76.4
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 2.3e-21 105.1 72 76.4
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 2.3e-21 105.1 71 73.2
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 74.0
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 3.8e-21 104.4 71 71.8
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 3.8e-21 104.4 73 74.0
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 5.0e-21 104.0 73 72.6
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 6.6e-21 103.6 73 71.2
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 8.6e-21 103.2 72 73.6
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 1.5e-20 102.4 72 75.0
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 1.5e-20 102.4 71 74.6
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 2.5e-20 101.7 67 73.1
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 3.3e-20 101.3 72 73.6
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 3.3e-20 101.3 71 71.8
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 9.5e-20 99.8 66 75.8
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 9.5e-20 99.8 70 74.3
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 2.8e-19 98.2 69 71.0
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.6e-19 97.8 69 72.5
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 3.6e-19 97.8 71 70.4
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 4.7e-19 97.4 66 74.2
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 6.1e-19 97.1 70 70.0
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.4e-18 95.9 70 68.6
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 1.8e-18 95.5 62 74.2
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 1.8e-18 95.5 71 64.8
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 2.3e-18 95.1 71 64.8
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 3.0e-18 94.7 69 66.7
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 4.0e-18 94.4 66 72.7
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 4.0e-18 94.4 70 67.1
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.8e-18 93.6 69 65.2
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 6.8e-18 93.6 66 68.2
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 6.8e-18 93.6 69 65.2
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 6.8e-18 93.6 67 70.1
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 8.9e-18 93.2 72 68.1
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.2e-17 92.8 69 65.2
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.5e-17 92.4 71 70.4
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.5e-17 92.4 67 68.7
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 2.0e-17 92.0 69 63.8
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 2.6e-17 91.7 66 68.2
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 2.6e-17 91.7 69 63.8
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 3.4e-17 91.3 71 60.6
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 3.4e-17 91.3 71 67.6
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 4.4e-17 90.9 69 65.2
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 4.4e-17 90.9 64 70.3
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 1.3e-16 89.4 71 73.2
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 1.3e-16 89.4 70 62.9
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 2.2e-16 88.6 65 69.2
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 2.2e-16 88.6 65 69.2
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 2.8e-16 88.2 69 66.7
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 4.9e-16 87.4 73 63.0
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 4.9e-16 87.4 72 63.9
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 6.3e-16 87.0 64 68.8
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 8.3e-16 86.7 64 65.6
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.4e-15 85.9 71 60.6
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.2e-15 84.7 64 64.1
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 3.2e-15 84.7 66 62.1
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 5.4e-15 84.0 69 59.4
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.2e-14 82.8 66 60.6
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 2.0e-14 82.0 70 64.3
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 2.0e-14 82.0 67 59.7
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 3.5e-14 81.3 67 59.7
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 4.6e-14 80.9 67 58.2
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 7.8e-14 80.1 67 58.2
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 1.0e-13 79.7 69 56.5
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.0e-13 79.7 88 51.1
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 1.3e-13 79.3 45 82.2
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 1.7e-13 79.0 67 58.2
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.7e-13 79.0 70 57.1
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 2.3e-13 78.6 61 60.7
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 2.9e-13 78.2 64 57.8
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 2.9e-13 78.2 67 58.2
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 3.9e-13 77.8 67 56.7
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 5.0e-13 77.4 67 56.7
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 5.0e-13 77.4 69 56.5
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 5.0e-13 77.4 69 56.5
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 5.0e-13 77.4 69 56.5
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 5.0e-13 77.4 69 56.5
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 6.6e-13 77.0 64 60.9
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.5e-12 75.1 59 59.3
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 3.3e-12 74.7 64 56.2
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 3.3e-12 74.7 68 54.4
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 3.3e-12 74.7 68 54.4
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 3.3e-12 74.7 64 56.2
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 7.3e-12 73.6 48 68.8
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 7.3e-12 73.6 71 57.7
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 4.7e-11 70.9 71 49.3
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 1.4e-10 69.3 69 52.2
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 1.4e-10 69.3 57 57.9
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 1.4e-10 69.3 69 52.2
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 2.3e-10 68.6 44 72.7
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.2e-09 66.2 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 1.3e-08 62.8 69 52.2
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 1.1e-07 59.7 46 65.2
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 1.9e-07 58.9 46 65.2
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.2e-07 58.2 46 67.4
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 7.0e-07 57.0 45 64.4
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 3.5e-06 54.7 46 58.7


User provided reference genes

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