Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 9.8e-65 250.0 126 100.0
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 4.9e-48 194.5 117 87.2
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.9e-47 192.6 117 84.6
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 3.5e-46 188.3 108 88.0
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.3e-45 185.7 126 78.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.6e-43 179.5 126 76.2
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.8e-43 178.7 130 76.9
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 1.7e-40 169.5 126 70.6
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.9e-40 168.7 136 70.6
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 6.4e-40 167.5 126 69.8
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 6.4e-40 167.5 126 70.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 1.9e-39 166.0 126 70.6
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.9e-39 166.0 132 71.2
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 3.2e-39 165.2 123 68.3
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.1e-39 164.9 126 70.6
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.6e-38 162.9 126 68.3
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.5e-38 161.8 107 73.8
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 4.6e-38 161.4 107 75.7
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.6e-38 161.4 119 70.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 6.0e-38 161.0 107 77.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 6.0e-38 161.0 119 72.3
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 6.0e-38 161.0 119 72.3
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.0e-37 160.2 126 68.3
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 1.0e-37 160.2 125 68.8
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.3e-37 159.1 117 70.1
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 3.9e-37 158.3 94 78.7
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 3.9e-37 158.3 102 73.5
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.9e-37 158.3 126 69.0
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 5.1e-37 157.9 103 75.7
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 8.6e-37 157.1 118 72.0
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 8.6e-37 157.1 94 77.7
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 8.6e-37 157.1 126 68.3
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.1e-36 156.8 126 65.9
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.5e-36 156.4 126 65.9
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 1.5e-36 156.4 126 67.5
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 2.5e-36 155.6 112 68.8
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 3.3e-36 155.2 126 64.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 3.3e-36 155.2 126 68.3
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 5.6e-36 154.5 92 79.3
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 7.3e-36 154.1 106 73.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.2e-35 153.3 126 65.9
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.2e-35 153.3 104 72.1
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-35 152.9 129 65.9
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-35 152.9 129 65.9
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.6e-35 152.9 106 72.6
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 1.6e-35 152.9 106 72.6
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.6e-35 152.9 107 70.1
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.1e-35 152.5 94 79.8
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.1e-35 152.5 106 70.8
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.8e-35 152.1 126 65.1
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 2.8e-35 152.1 126 62.7
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 2.8e-35 152.1 106 70.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 3.6e-35 151.8 107 70.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 3.6e-35 151.8 127 68.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 6.2e-35 151.0 126 64.3
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 6.2e-35 151.0 126 64.3
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 6.2e-35 151.0 126 64.3
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 6.2e-35 151.0 126 64.3
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.2e-35 151.0 103 72.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 8.1e-35 150.6 106 69.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.1e-34 150.2 92 76.1
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-34 150.2 106 71.7
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-34 149.8 95 76.8
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.8e-34 149.4 126 63.5
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.8e-34 149.4 92 78.3
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 2.3e-34 149.1 107 68.2
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.3e-34 149.1 126 63.5
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-34 149.1 126 63.5
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-34 149.1 126 63.5
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-34 149.1 126 63.5
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 2.3e-34 149.1 101 73.3
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 4.0e-34 148.3 126 61.9
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 4.0e-34 148.3 126 63.5
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 4.0e-34 148.3 96 75.0
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.2e-34 147.9 128 60.9
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 6.8e-34 147.5 126 61.1
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.2e-33 146.7 98 72.4
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 2.0e-33 146.0 112 65.2
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.4e-33 144.8 119 62.2
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 5.8e-33 144.4 84 86.9
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 5.8e-33 144.4 126 61.9
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 9.9e-33 143.7 107 66.4
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.7e-32 142.9 101 72.3
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.2e-32 142.5 118 61.0
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 4.9e-32 141.4 130 58.5
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.2e-30 136.7 82 75.6
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 8.6e-29 130.6 114 57.0
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.1e-27 124.0 101 58.4
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.4e-26 123.2 83 77.1
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 4.0e-26 121.7 99 56.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 5.8e-25 117.9 132 56.8
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 9.9e-25 117.1 89 69.7
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 9.3e-23 110.5 90 51.1
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.1e-22 109.4 80 70.0
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.6e-22 108.2 81 59.3
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 3.0e-21 105.5 66 75.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 7.3e-20 100.9 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.8e-18 96.3 77 54.5
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 9.9e-17 90.5 58 79.3
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 6.9e-10 67.8 92 31.5
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 3.2e-07 58.9 78 34.6
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.1e-06 56.2 36 75.0


User provided reference genes

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