Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g028890 Medicago truncatula HOM05D013642 ORTHO05D014592 2.3e-117 425.6 221 100.0
Medtr7g022250 Medicago truncatula HOM05D013642 ORTHO05D014592 3.3e-84 315.5 234 71.8
Medtr7g028915 Medicago truncatula HOM05D013642 ORTHO05D014592 1.2e-65 253.8 235 63.0
TPR.G7061 Trifolium pratense HOM05D013642 ORTHO05D014592 8.5e-48 194.5 234 52.1
TPR.G29067 Trifolium pratense HOM05D013642 ORTHO05D014592 2.8e-43 179.5 234 48.3
TPR.G4577 Trifolium pratense HOM05D013642 ORTHO05D014592 3.1e-42 176.0 212 53.3
Medtr7g022270 Medicago truncatula HOM05D013642 ORTHO05D014592 1.6e-41 173.7 184 54.9
Psat3g086400 Pisum sativum HOM05D013642 ORTHO05D014592 5.9e-33 145.2 200 48.5
Psat3g082040 Pisum sativum HOM05D013642 ORTHO05D014592 3.1e-21 106.3 209 35.4
Ca_08703_v3 Cicer arietinum L. HOM05D013642 ORTHO05D014592 2.0e-20 103.6 177 42.9
TPR.G25949 Trifolium pratense HOM05D013642 ORTHO05D014592 5.1e-08 62.4 107 41.1
Lalb_Chr15g0078861 Lupinus albus HOM05D053028 ORTHO05D014592 1.9e-07 60.5 224 29.9
Gorai.010G215100 Gossypium raimondii HOM05D000333 ORTHO05D000190 4.3e-07 59.3 46 52.2
Hma1.2p1_0233F.1_g098180 Hydrangea macrophylla HOM05D000333 ORTHO05D000190 4.3e-07 59.3 78 37.2
Migut.J01452 Erythranthe guttata HOM05D000333 ORTHO05D000190 9.6e-07 58.2 80 42.5
AL675U10010 Arabidopsis lyrata HOM05D000333 ORTHO05D000190 1.2e-06 57.8 71 43.7
A07p33140 Brassica napus HOM05D000333 ORTHO05D000190 1.2e-06 57.8 72 38.9
Duzib114G0860 Durio zibethinus HOM05D000333 ORTHO05D000190 1.2e-06 57.8 39 61.5
AT5G57520 Arabidopsis thaliana HOM05D000333 ORTHO05D000190 2.1e-06 57.0 76 40.8
arahy.Tifrunner.gnm1.ann1.8LSN0I Arachis hypogaea HOM05D054809 ORTHO05D038820 2.1e-06 57.0 116 37.1
Gohir.A06G173702 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.1e-06 57.0 90 35.6
Gohir.D06G183766 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.1e-06 57.0 90 35.6
Psat6g134440 Pisum sativum HOM05D010505 ORTHO05D012796 2.1e-06 57.0 123 35.0
BraA07t30942Z Brassica rapa HOM05D000333 ORTHO05D000190 2.8e-06 56.6 72 37.5
Carub.0008s1802 Capsella rubella HOM05D000333 ORTHO05D000190 2.8e-06 56.6 76 38.2
Thhalv10015445m.g Eutrema salsugineum HOM05D000333 ORTHO05D000190 2.8e-06 56.6 73 39.7
Lsat_1_v5_gn_5_116600 Lactuca sativa HOM05D000333 ORTHO05D000190 2.8e-06 56.6 47 48.9
Lalb_Chr22g0357931 Lupinus albus HOM05D010505 ORTHO05D000190 2.8e-06 56.6 81 39.5
AL8G33460 Arabidopsis lyrata HOM05D000333 ORTHO05D000190 3.6e-06 56.2 71 42.3
BcaB01g04450 Brassica carinata HOM05D000333 ORTHO05D000190 3.6e-06 56.2 77 36.4
Eucgr.C00171 Eucalyptus grandis HOM05D000333 ORTHO05D000190 3.6e-06 56.2 86 39.5
Lalb_Chr18g0047651 Lupinus albus HOM05D053028 ORTHO05D014592 3.6e-06 56.2 127 34.6
Manes.08G161500 Manihot esculenta HOM05D000333 ORTHO05D000190 3.6e-06 56.2 41 56.1
RcHm_v2.0_Chr4g0402731 Rosa chinensis HOM05D000333 ORTHO05D000190 3.6e-06 56.2 50 50.0
Glyma.17G064700 Glycine max HOM05D000333 ORTHO05D000190 4.7e-06 55.8 39 61.5
Lj7P472T18 Lonicera japonica HOM05D000333 ORTHO05D000190 4.7e-06 55.8 49 51.0
Lj6g0017966 Lotus japonicus HOM05D000333 ORTHO05D000190 4.7e-06 55.8 75 34.7
Oeu060776.1 Olea europaea HOM05D030945 ORTHO05D014592 4.7e-06 55.8 40 57.5
TPR.G37910 Trifolium pratense HOM05D010505 ORTHO05D000190 4.7e-06 55.8 72 38.9
VMungo1383G0068 Vigna mungo HOM05D000333 ORTHO05D000190 4.7e-06 55.8 58 43.1
Zm00001eb320440 Zea mays HOM05D000333 ORTHO05D000190 4.7e-06 55.8 48 54.2
arahy.Tifrunner.gnm1.ann1.TLFL18 Arachis hypogaea HOM05D054809 ORTHO05D038820 6.2e-06 55.5 114 35.1
COL.COLO4_18932 Corchorus olitorius HOM05D000333 ORTHO05D000190 6.2e-06 55.5 156 31.4
MELO3C016976.2 Cucumis melo HOM05D000333 ORTHO05D000190 6.2e-06 55.5 47 51.1
Lj3g0021707 Lotus japonicus HOM05D000333 ORTHO05D000190 6.2e-06 55.5 52 46.2
Lalb_Chr09g0328931 Lupinus albus HOM05D010505 ORTHO05D000190 6.2e-06 55.5 113 33.6
PGR031G1471 Punica granatum HOM05D000333 ORTHO05D000190 6.2e-06 55.5 75 36.0
TPR.G22082 Trifolium pratense HOM05D010505 ORTHO05D014594 6.2e-06 55.5 76 39.5
AT5G01860 Arabidopsis thaliana HOM05D000333 ORTHO05D000190 8.1e-06 55.1 73 35.6
C06p39400 Brassica napus HOM05D000333 ORTHO05D000190 8.1e-06 55.1 72 37.5
Lj4g0020953 Lotus japonicus HOM05D000333 ORTHO05D000190 8.1e-06 55.1 85 36.5


User provided reference genes

Program Settings