Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 1.1e-81 307.0 211 100.0
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 1.5e-41 173.7 198 60.1
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 7.2e-36 154.8 216 56.0
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 2.8e-32 142.9 148 62.8
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 1.4e-31 140.6 148 62.2
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 1.4e-31 140.6 148 62.2
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 5.3e-31 138.7 198 52.0
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 7.7e-30 134.8 198 51.5
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 3.6e-27 125.9 106 57.5
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 3.0e-26 122.9 100 58.0
TPR.G1196 Trifolium pratense HOM05D008051 ORTHO05D009905 1.3e-24 117.5 93 64.5
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 4.5e-22 109.0 106 52.8
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 2.4e-15 86.7 91 45.1
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 3.1e-15 86.3 156 51.9
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 1.0e-13 81.3 109 45.9
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 3.8e-13 79.3 99 38.4
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 3.8e-13 79.3 87 41.4
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 6.5e-13 78.6 92 41.3
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.5e-12 77.4 87 40.2
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.5e-12 77.4 91 40.7
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 1.5e-12 77.4 99 45.5
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.9e-12 77.0 148 49.3
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 2.5e-12 76.6 102 43.1
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 2.5e-12 76.6 93 39.8
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 3.2e-12 76.3 99 40.4
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 4.2e-12 75.9 91 38.5
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 4.2e-12 75.9 95 40.0
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 5.5e-12 75.5 93 40.9
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 5.5e-12 75.5 93 39.8
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 7.2e-12 75.1 93 36.6
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 9.4e-12 74.7 50 60.0
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 1.2e-11 74.3 87 39.1
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 1.2e-11 74.3 100 38.0
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 1.6e-11 73.9 139 50.4
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 2.1e-11 73.6 94 43.6
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 4.7e-11 72.4 99 40.4
Medtr8g442580 Medicago truncatula HOM05D008051 ORTHO05D009905 6.1e-11 72.0 82 42.7
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 8.0e-11 71.6 98 37.8
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 1.4e-10 70.9 114 36.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 1.4e-10 70.9 145 46.2
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 5.2e-10 68.9 96 40.6
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 6.8e-10 68.6 93 61.3
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 8.8e-10 68.2 48 52.1
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 1.2e-09 67.8 75 42.7
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 2.6e-09 66.6 94 39.4
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 4.4e-09 65.9 63 46.0
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 4.4e-09 65.9 94 61.7
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 5.7e-09 65.5 58 46.6
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 7.5e-09 65.1 70 44.3
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 9.8e-09 64.7 93 36.6
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 1.7e-08 63.9 46 54.3
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 3.7e-08 62.8 45 55.6
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 8.3e-08 61.6 96 36.5
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 1.1e-07 61.2 100 38.0
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 1.1e-07 61.2 43 55.8
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 1.8e-07 60.5 50 52.0
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 1.8e-07 60.5 93 35.5
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 2.4e-07 60.1 66 43.9
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 7.0e-07 58.5 103 32.0
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 2.7e-06 56.6 48 47.9
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 2.7e-06 56.6 44 47.7
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 3.5e-06 56.2 97 37.1
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 4.5e-06 55.8 104 36.5
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 5.9e-06 55.5 98 33.7
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 5.9e-06 55.5 43 51.2


User provided reference genes

Program Settings