Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g024810 Medicago truncatula HOM05D008332 ORTHO05D010135 0.0e+00 1128.2 551 100.0
Medtr2g083020 Medicago truncatula HOM05D008332 ORTHO05D010135 1.4e-309 1065.4 529 98.7
Medtr6g012930 Medicago truncatula HOM05D008332 ORTHO05D010135 2.1e-284 981.9 550 89.6
Medtr2g009940 Medicago truncatula HOM05D008332 ORTHO05D010135 2.4e-280 968.4 552 88.8
Medtr6g014585 Medicago truncatula HOM05D008332 ORTHO05D010135 2.5e-258 895.2 441 99.1
Medtr3g030280 Medicago truncatula HOM05D008332 ORTHO05D010135 3.4e-239 831.6 449 91.3
Medtr7g029850 Medicago truncatula HOM05D008332 ORTHO05D010135 8.2e-225 783.9 442 88.9
Medtr7g045330 Medicago truncatula HOM05D008332 ORTHO05D010135 2.0e-170 603.2 535 61.3
Medtr6g014575 Medicago truncatula HOM05D008332 ORTHO05D010135 5.4e-160 568.5 284 98.2
Medtr5g454250 Medicago truncatula HOM05D008332 ORTHO05D010135 4.8e-140 502.3 453 58.1
Medtr6g033460 Medicago truncatula HOM05D008332 ORTHO05D010135 4.9e-76 289.7 423 40.2
Medtr7g031160 Medicago truncatula HOM05D008332 ORTHO05D010135 4.1e-59 233.4 428 35.0
Medtr0039s0050 Medicago truncatula HOM05D008332 ORTHO05D010135 2.4e-51 207.6 268 45.5
TPR.G18935 Trifolium pratense HOM05D008332 ORTHO05D010135 7.8e-50 202.6 413 33.7
Medtr0053s0080 Medicago truncatula HOM05D008332 ORTHO05D010135 4.0e-46 190.3 130 67.7
TPR.G29188 Trifolium pratense HOM05D008332 ORTHO05D010135 5.1e-41 173.3 323 35.3
TPR.G22724 Trifolium pratense HOM05D008332 ORTHO05D010135 6.6e-41 172.9 274 38.7
TPR.G30395 Trifolium pratense HOM05D008332 ORTHO05D010135 1.1e-40 172.2 289 34.3
TPR.G18967 Trifolium pratense HOM05D008332 ORTHO05D010135 4.0e-38 163.7 256 36.7
TPR.G38548 Trifolium pratense HOM05D008332 ORTHO05D010135 4.0e-38 163.7 256 36.7
Medtr7g016020 Medicago truncatula HOM05D008332 ORTHO05D010135 7.6e-37 159.5 179 51.4
Medtr0019s0170 Medicago truncatula HOM05D008332 ORTHO05D010135 2.5e-32 144.4 220 42.7
TPR.G39718 Trifolium pratense HOM05D008332 ORTHO05D010135 3.7e-31 140.6 212 34.9
TPR.G14040 Trifolium pratense HOM05D008332 ORTHO05D010135 2.2e-28 131.3 165 42.4
TPR.G39889 Trifolium pratense HOM05D008332 ORTHO05D010135 2.9e-28 131.0 165 43.0
TPR.G20348 Trifolium pratense HOM05D008332 ORTHO05D010135 1.1e-27 129.0 160 43.8
Medtr3g026190 Medicago truncatula HOM05D000572 ORTHO05D002399 2.4e-27 127.9 158 49.4
Medtr7g031230 Medicago truncatula HOM05D008332 ORTHO05D010135 2.5e-24 117.9 301 30.2
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.2e-23 113.2 401 27.2
TPR.G8862 Trifolium pratense HOM05D008332 ORTHO05D010135 6.2e-23 113.2 137 44.5
Medtr6g043450 Medicago truncatula HOM05D008332 ORTHO05D010135 6.9e-22 109.8 222 33.8
TPR.G62 Trifolium pratense HOM05D008332 ORTHO05D010135 2.2e-20 104.8 177 35.0
VMungo0496G0001 Vigna mungo HOM05D009855 ORTHO05D010135 9.3e-19 99.4 438 24.7
TPR.G12046 Trifolium pratense HOM05D008332 ORTHO05D010135 1.2e-18 99.0 165 37.0
Psat0s9821g0040 Pisum sativum HOM05D008332 ORTHO05D010135 1.0e-17 95.9 136 39.0
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 1.3e-17 95.5 322 26.4
Psat0s2056g0080 Pisum sativum HOM05D008332 ORTHO05D010135 3.9e-17 94.0 137 40.1
TPR.G34605 Trifolium pratense HOM05D008332 ORTHO05D010135 6.7e-17 93.2 123 42.3
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 8.7e-17 92.8 236 30.1
Phvul.003G122800 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 7.4e-16 89.7 407 25.3
Phvul.008G175400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 7.4e-16 89.7 355 24.8
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 1.3e-15 89.0 382 23.3
VMungo1309G2955 Vigna mungo HOM05D009855 ORTHO05D010135 1.6e-15 88.6 373 24.7
Medtr3g456010 Medicago truncatula HOM05D008332 ORTHO05D010135 2.8e-15 87.8 223 30.5
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 1.4e-14 85.5 285 24.2
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 4.1e-14 84.0 319 24.1
Phvul.007G113900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 9.0e-14 82.8 427 24.6
Phvul.007G133900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.5e-13 80.5 210 26.7
Phvul.004G109100 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 7.7e-13 79.7 264 26.9
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 7.7e-13 79.7 402 23.9
Medtr5g095330 Medicago truncatula HOM05D005718 ORTHO05D004853 1.3e-12 79.0 263 28.1
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 2.9e-12 77.8 326 23.6
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 2.9e-12 77.8 373 23.3
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 5.0e-12 77.0 286 26.2
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 3.2e-11 74.3 339 23.3
Psat6g160080 Pisum sativum HOM05D008332 ORTHO05D010135 5.5e-11 73.6 89 38.2
TPR.G7345 Trifolium pratense HOM05D008332 ORTHO05D010135 5.5e-11 73.6 102 39.2
Phvul.005G066300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 9.4e-11 72.8 180 28.3
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.1e-10 71.6 327 24.5
Migut.O00074 Erythranthe guttata HOM05D029106 ORTHO05D003532 2.1e-10 71.6 300 26.3
VMungo0540G1633 Vigna mungo HOM05D000014 ORTHO05D000093 2.1e-10 71.6 454 23.6
Migut.K01060 Erythranthe guttata HOM05D029106 ORTHO05D003532 2.7e-10 71.2 302 25.2
Phvul.001G132400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.6e-10 70.5 372 22.3
Glyma.09G117500 Glycine max HOM05D005718 ORTHO05D004853 6.1e-10 70.1 282 25.9
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 1.0e-09 69.3 278 25.9
VMungo0251G1225 Vigna mungo HOM05D000014 ORTHO05D000016 1.0e-09 69.3 410 23.7
PGSC0003DMG400047132 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.1e-09 67.0 208 26.9
arahy.Tifrunner.gnm1.ann1.N9HB9M Arachis hypogaea HOM05D005718 ORTHO05D004853 6.7e-09 66.6 230 22.6
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 6.7e-09 66.6 255 26.3
VMungo0331G1190 Vigna mungo HOM05D009155 ORTHO05D004853 8.8e-09 66.2 403 21.8
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-08 65.9 240 25.8
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 1.1e-08 65.9 243 25.9
Ca_12054_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-08 65.5 241 24.5
Ca_02735_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-08 65.1 237 25.3
VMungo0251G0612 Vigna mungo HOM05D009155 ORTHO05D004853 2.0e-08 65.1 210 25.7
Lalb_Chr09g0324261 Lupinus albus HOM05D009855 ORTHO05D010135 4.3e-08 63.9 180 27.8
VMungo0251G0465 Vigna mungo HOM05D009155 ORTHO05D004853 4.3e-08 63.9 264 22.0
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-08 63.5 324 23.8
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 7.4e-08 63.2 223 24.7
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.7e-08 62.8 324 23.8
VMungo0647G1817 Vigna mungo HOM05D009155 ORTHO05D004853 9.7e-08 62.8 195 27.7
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-07 62.4 240 23.8
Phvul.003G065900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.3e-07 62.4 160 30.0
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 1.3e-07 62.4 229 27.1
DCAR_017447 Daucus carota HOM05D007234 ORTHO05D008488 2.2e-07 61.6 240 24.2
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 2.2e-07 61.6 279 24.7
VMungo0464G1989 Vigna mungo HOM05D009155 ORTHO05D004853 2.2e-07 61.6 296 23.0
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.8e-07 61.2 324 23.1
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.8e-07 61.2 208 25.0
Phvul.001G121300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.8e-07 60.5 154 29.2
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-07 60.5 213 23.9
Oeu010198.1 Olea europaea HOM05D001351 ORTHO05D001203 6.3e-07 60.1 271 26.6
VMungo0647G1872 Vigna mungo HOM05D009155 ORTHO05D004853 8.2e-07 59.7 259 24.3
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-06 59.3 301 24.6
Ca_28548_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-06 59.3 180 25.6
Ca_23989_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-06 58.9 226 23.9
Ca_28538_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-06 58.9 241 22.4
Phvul.009G112900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.4e-06 58.9 116 32.8
VMungo0331G0576 Vigna mungo HOM05D009155 ORTHO05D004853 3.1e-06 57.8 144 24.3
Lalb_Chr11g0071031 Lupinus albus HOM05D009855 ORTHO05D001203 4.1e-06 57.4 92 33.7
VMungo0251G1119 Vigna mungo HOM05D009155 ORTHO05D004853 4.1e-06 57.4 309 21.7


User provided reference genes

Program Settings