Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-104 382.9 208 100.0
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.8e-68 263.1 216 62.0
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.5e-67 258.5 217 60.4
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.3e-66 256.1 217 59.0
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 5.5e-65 251.5 216 59.3
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 7.2e-65 251.1 212 59.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-60 235.7 217 56.2
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.7e-58 229.9 216 54.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.7e-58 229.9 216 54.2
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.3e-58 229.6 216 54.2
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.3e-58 229.6 216 54.2
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 6.6e-58 228.0 182 61.5
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 4.3e-57 225.3 218 53.7
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-55 220.7 219 53.0
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-53 213.4 218 50.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-53 212.2 218 50.5
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 7.5e-46 188.0 205 46.8
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-45 186.4 205 46.3
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 6.4e-45 184.9 205 45.9
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-44 184.1 207 47.3
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-43 180.6 212 45.3
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-43 179.9 212 46.7
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.5e-43 179.1 212 46.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.5e-43 179.1 212 46.7
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 1.3e-42 177.2 211 46.0
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-42 177.2 214 44.4
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.6e-42 174.5 208 46.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-41 174.1 214 43.9
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-41 173.3 211 44.1
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-41 173.3 211 44.1
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.5e-41 171.0 213 44.1
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.1e-40 169.9 211 43.1
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 6.2e-40 168.3 211 43.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-39 166.8 213 42.3
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.5e-38 163.7 210 43.3
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.4e-38 162.2 211 40.8
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 4.4e-38 162.2 212 43.4
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 5.8e-38 161.8 120 63.3
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.8e-38 161.8 211 41.7
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.9e-38 161.0 212 43.4
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.2e-37 159.8 167 50.9
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-37 159.8 211 40.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-37 159.5 211 40.3
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-37 159.1 211 40.3
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 4.9e-37 158.7 211 41.2
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.3e-37 157.9 212 42.9
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 8.3e-37 157.9 216 40.7
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-36 156.4 207 42.5
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-36 155.6 211 40.3
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 4.1e-36 155.6 211 40.3
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 3.5e-35 152.5 215 39.5
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-34 149.8 211 38.9
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-33 146.7 210 40.0
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-33 146.7 210 40.0
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-33 146.7 210 40.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.9e-33 146.7 168 46.4
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 9.5e-33 144.4 177 44.6
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.2e-32 144.1 209 39.2
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-32 144.1 195 44.6
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-32 144.1 212 37.7
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 3.6e-32 142.5 211 39.3
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.1e-32 141.4 211 40.3
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-31 141.0 211 36.0
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.5e-30 137.1 167 45.5
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-30 137.1 202 38.1
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 3.4e-30 136.0 126 53.2
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 3.4e-30 136.0 126 53.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 4.4e-30 135.6 182 43.4
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-29 133.7 171 40.9
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.2e-29 133.3 210 38.1
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 4.9e-29 132.1 164 42.7
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 6.4e-29 131.7 217 37.8
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-29 131.3 211 37.9
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-29 131.3 194 37.1
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-28 129.4 166 41.6
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.2e-28 127.9 221 35.3
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-27 127.5 194 36.6
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 4.6e-27 125.6 120 51.7
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 6.0e-27 125.2 199 38.2
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.0e-26 124.4 214 35.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-26 124.4 189 41.3
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 8.7e-26 121.3 199 37.7
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-25 120.6 204 35.8
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.6e-25 118.6 122 51.6
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.3e-25 118.2 207 34.8
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.3e-25 118.2 205 37.1
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-24 117.5 124 46.8
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-24 116.3 211 37.0
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-24 116.3 211 37.0
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.6e-24 115.9 218 36.7
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-23 114.4 119 45.4
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-23 113.2 206 35.4
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-23 112.1 239 32.6
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.9e-23 111.7 160 40.6
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-22 110.9 170 37.6
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-22 109.4 195 35.4
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 4.4e-22 109.0 119 47.9
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 7.1e-20 101.7 205 35.6
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-20 101.7 123 45.5
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.7e-19 99.8 124 44.4
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 4.6e-19 99.0 192 33.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-18 97.8 120 42.5
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-18 96.7 192 32.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.9e-17 93.6 76 57.9
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.3e-17 92.8 158 37.3
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-17 92.4 158 36.7
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 4.3e-17 92.4 158 38.6
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.3e-17 91.7 184 33.7
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.6e-16 90.5 123 36.6
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-16 88.6 151 36.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-15 87.4 93 44.1
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.3e-15 85.5 129 40.3
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 9.0e-15 84.7 217 30.0
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-14 84.3 217 29.5
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.9e-13 79.7 217 30.0
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-12 75.9 86 47.7
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-12 75.9 84 46.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-12 75.1 163 33.7
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-10 71.2 134 35.1
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-10 70.5 130 37.7
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 5.6e-09 65.5 86 43.0
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 7.4e-09 65.1 76 48.7
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 4.8e-08 62.4 188 30.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 2.4e-07 60.1 132 34.8
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 1.2e-06 57.8 121 31.4
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 4.5e-06 55.8 81 38.3
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-06 55.1 129 29.5


User provided reference genes

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