Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g075925 Medicago truncatula HOM05D000151 ORTHO05D000074 2.6e-43 178.3 89 100.0
Medtr3g029650 Medicago truncatula HOM05D000151 ORTHO05D000074 1.9e-14 82.4 84 53.6
Medtr1g026850 Medicago truncatula HOM05D000151 ORTHO05D000074 4.0e-12 74.7 63 58.7
Medtr6g076200 Medicago truncatula HOM05D000151 ORTHO05D000074 3.4e-11 71.6 45 80.0
Medtr1g007230 Medicago truncatula HOM05D000151 ORTHO05D000074 4.4e-11 71.2 46 67.4
Medtr3g030355 Medicago truncatula HOM05D000151 ORTHO05D000074 9.8e-11 70.1 73 52.1
Medtr2g047180 Medicago truncatula HOM05D000151 ORTHO05D000074 4.9e-10 67.8 41 75.6
Medtr6g027040 Medicago truncatula HOM05D000151 ORTHO05D000074 6.3e-10 67.4 45 68.9
Medtr6g018360 Medicago truncatula HOM05D000151 ORTHO05D000074 1.4e-09 66.2 87 44.8
Medtr3g029840 Medicago truncatula HOM05D000151 ORTHO05D000074 1.8e-09 65.9 84 45.2
Medtr6g027100 Medicago truncatula HOM05D000151 ORTHO05D000074 2.4e-09 65.5 88 45.5
Medtr3g030480 Medicago truncatula HOM05D000151 ORTHO05D000074 4.1e-09 64.7 67 53.7
Medtr3g029750 Medicago truncatula HOM05D000151 ORTHO05D000074 7.0e-09 63.9 47 63.8
Medtr3g030380 Medicago truncatula HOM05D000151 ORTHO05D000074 7.0e-09 63.9 42 69.0
TPR.G35299 Trifolium pratense HOM05D000151 ORTHO05D000074 7.0e-09 63.9 42 69.0
Medtr6g018390 Medicago truncatula HOM05D000151 ORTHO05D000074 9.2e-09 63.5 45 62.2
Medtr1g016570 Medicago truncatula HOM05D000151 ORTHO05D000074 1.2e-08 63.2 43 69.8
Medtr3g029670 Medicago truncatula HOM05D000151 ORTHO05D000074 2.0e-08 62.4 47 63.8
Medtr3g029870 Medicago truncatula HOM05D000151 ORTHO05D000074 2.0e-08 62.4 67 47.8
Medtr3g030440 Medicago truncatula HOM05D000151 ORTHO05D000074 2.0e-08 62.4 66 53.0
Medtr3g029920 Medicago truncatula HOM05D000151 ORTHO05D000074 2.7e-08 62.0 43 62.8
Medtr6g018400 Medicago truncatula HOM05D000151 ORTHO05D000074 2.7e-08 62.0 46 67.4
Medtr3g029640 Medicago truncatula HOM05D000151 ORTHO05D000074 5.9e-08 60.8 46 63.0
TPR.G27029 Trifolium pratense HOM05D001528 ORTHO05D002760 5.9e-08 60.8 41 65.9
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 1.0e-07 60.1 39 69.2
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 1.7e-07 59.3 39 69.2
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.7e-07 59.3 42 61.9
Medtr1g007260 Medicago truncatula HOM05D000151 ORTHO05D000074 1.7e-07 59.3 48 60.4
Medtr3g029620 Medicago truncatula HOM05D000151 ORTHO05D000074 1.7e-07 59.3 46 60.9
Medtr3g030080 Medicago truncatula HOM05D000151 ORTHO05D000074 1.7e-07 59.3 44 63.6
Psat5g209160 Pisum sativum HOM05D000151 ORTHO05D000074 2.9e-07 58.5 43 55.8
Medtr3g047980 Medicago truncatula HOM05D000151 ORTHO05D000074 5.0e-07 57.8 67 46.3
Medtr3g029820 Medicago truncatula HOM05D000151 ORTHO05D000074 6.6e-07 57.4 41 65.9
Medtr3g030360 Medicago truncatula HOM05D000151 ORTHO05D000074 6.6e-07 57.4 76 40.8
Medtr6g018370 Medicago truncatula HOM05D000151 ORTHO05D000074 6.6e-07 57.4 43 67.4
Medtr3g029950 Medicago truncatula HOM05D000151 ORTHO05D000074 8.6e-07 57.0 80 45.0
Sp3g30320 Schrenkiella parvula HOM05D000151 ORTHO05D000074 8.6e-07 57.0 39 61.5
Medtr6g018420 Medicago truncatula HOM05D000151 ORTHO05D000074 1.1e-06 56.6 38 63.2
Psat5g209280 Pisum sativum HOM05D000151 ORTHO05D000074 1.1e-06 56.6 42 64.3
Medtr3g030050 Medicago truncatula HOM05D000151 ORTHO05D000074 1.5e-06 56.2 42 66.7
Psat5g209400 Pisum sativum HOM05D000151 ORTHO05D000074 1.5e-06 56.2 47 57.4
VMungo1080G0462 Vigna mungo HOM05D000151 ORTHO05D000074 1.5e-06 56.2 38 71.1
LjContig00081g0016741 Lotus japonicus HOM05D000151 ORTHO05D000074 1.9e-06 55.8 41 65.9
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.9e-06 55.8 41 61.0
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.9e-06 55.8 41 61.0
Aa31LG8G14220 Aethionema arabicum HOM05D000151 ORTHO05D000074 2.5e-06 55.5 39 59.0
BcaB08g34687 Brassica carinata HOM05D000151 ORTHO05D000074 2.5e-06 55.5 39 64.1
Cc00_g28600 Coffea canephora HOM05D000151 ORTHO05D000074 3.3e-06 55.1 39 66.7
Phvul.005G022400 Phaseolus vulgaris HOM05D000151 ORTHO05D000074 3.3e-06 55.1 38 68.4
Lalb_Chr25g0283041 Lupinus albus HOM05D000151 ORTHO05D000074 4.3e-06 54.7 43 62.8
Medtr3g058460 Medicago truncatula HOM05D000151 ORTHO05D000074 4.3e-06 54.7 36 69.4
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 5.6e-06 54.3 39 64.1
BcaC01g02965 Brassica carinata HOM05D000151 ORTHO05D000074 5.6e-06 54.3 37 67.6
C03p57820 Brassica napus HOM05D000151 ORTHO05D000074 5.6e-06 54.3 37 67.6
BolC3t18053H Brassica oleracea HOM05D000151 ORTHO05D000074 5.6e-06 54.3 37 67.6
Thhalv10022716m.g Eutrema salsugineum HOM05D000151 ORTHO05D000074 5.6e-06 54.3 40 60.0
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 5.6e-06 54.3 37 64.9
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 7.3e-06 53.9 39 61.5
arahy.Tifrunner.gnm1.ann1.2FAG51 Arachis hypogaea HOM05D000151 ORTHO05D000074 7.3e-06 53.9 40 62.5
CSS0014442 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 7.3e-06 53.9 41 58.5
CARHR107350 Cardamine hirsuta HOM05D000151 ORTHO05D000074 7.3e-06 53.9 40 60.0
Medtr3g092000 Medicago truncatula HOM05D000151 ORTHO05D000074 7.3e-06 53.9 48 54.2
Medtr3g091990 Medicago truncatula HOM05D000151 ORTHO05D000074 9.5e-06 53.5 45 55.6


User provided reference genes

Program Settings