Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 5.2e-149 531.2 301 100.0
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-78 296.2 306 53.9
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-64 250.4 301 44.2
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-62 243.8 303 44.6
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-47 194.1 304 38.8
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-46 189.1 298 36.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.8e-41 173.3 301 36.2
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-39 166.4 303 34.3
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-38 164.5 300 33.3
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-38 164.1 255 38.0
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 2.4e-37 160.2 299 33.4
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-35 153.7 304 33.9
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-35 153.7 284 34.2
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.1e-35 152.5 300 31.7
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 6.6e-35 152.1 300 30.7
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 6.6e-35 152.1 300 31.3
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-34 150.6 304 30.3
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-34 149.8 303 29.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-34 149.8 301 31.6
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-33 147.1 303 29.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-33 146.7 303 33.0
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-32 144.8 301 30.6
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-32 144.4 302 30.5
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-32 144.4 298 32.9
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-32 144.4 302 31.8
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-32 142.9 266 32.0
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 6.9e-32 142.1 306 30.4
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.0e-32 141.7 301 29.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.0e-32 141.7 301 29.9
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-31 141.4 302 29.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-31 140.2 304 29.6
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-31 139.8 303 30.0
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-30 137.9 301 31.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-30 137.9 301 31.2
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-30 137.9 302 28.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-30 137.5 301 30.9
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.2e-30 137.1 299 28.1
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-30 136.7 303 30.4
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-30 136.3 303 31.4
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-30 136.3 303 31.0
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-30 136.0 300 29.0
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.9e-30 136.0 303 31.4
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 4.9e-30 136.0 300 28.7
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.4e-30 135.6 302 30.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-30 135.2 304 29.9
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-30 135.2 300 30.3
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.1e-29 134.8 382 25.7
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-29 134.8 303 29.7
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-29 134.8 303 29.7
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.9e-29 134.0 303 30.7
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-29 134.0 303 30.7
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 4.2e-29 132.9 302 28.1
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.3e-29 131.7 306 29.7
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-28 131.3 300 28.0
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-28 131.3 302 28.1
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.7e-28 130.2 300 27.3
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.5e-28 129.8 301 28.6
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.0e-28 129.0 300 26.7
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 7.8e-28 128.6 302 29.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 7.8e-28 128.6 302 29.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 7.8e-28 128.6 302 29.1
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-27 127.9 304 29.6
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 3.0e-27 126.7 296 28.0
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.9e-27 126.3 299 27.1
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.1e-27 125.9 308 27.3
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.7e-27 125.2 308 26.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.6e-26 122.5 274 28.5
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.2e-25 119.0 303 28.4
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.1e-25 118.6 287 29.6
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.1e-24 118.2 302 26.5
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.4e-24 117.9 302 27.5
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-24 117.9 304 27.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-24 117.1 303 27.7
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-24 116.7 287 29.3
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.0e-24 116.3 303 28.7
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-21 108.2 303 28.7
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-21 108.2 278 28.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-21 107.5 324 25.6
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.2e-21 106.7 307 27.4
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 3.2e-21 106.7 306 27.5
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.1e-21 105.5 306 26.1
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-20 104.8 302 27.2
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.1e-20 104.0 311 25.4
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-19 101.7 132 40.2
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 3.9e-19 99.8 92 45.7
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 6.7e-19 99.0 100 48.0
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 8.7e-19 98.6 306 25.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.9e-18 97.4 88 50.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 4.3e-18 96.3 306 24.5
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 7.4e-18 95.5 225 27.6
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-17 94.7 130 37.7
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-17 93.6 126 38.9
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-17 93.6 126 38.9
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.7e-17 93.2 129 38.0
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.4e-16 91.3 86 50.0
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 6.9e-16 89.0 132 36.4
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-15 87.8 93 44.1
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 3.4e-15 86.7 131 35.1
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 5.8e-15 85.9 283 24.7
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.8e-15 85.9 228 25.0
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.8e-15 85.9 122 36.9
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 7.6e-15 85.5 275 26.5
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 9.9e-15 85.1 224 24.1
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 9.9e-15 85.1 110 39.1
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-14 84.7 271 25.8
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-14 84.0 122 39.3
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 3.8e-14 83.2 85 49.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 8.4e-14 82.0 120 37.5
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-13 80.5 95 43.2
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-13 80.5 95 43.2
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-12 76.6 126 34.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.5e-12 76.6 90 48.9
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.0e-12 75.9 298 23.8
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 3.9e-11 73.2 89 43.8
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.7e-11 72.0 86 40.7
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.5e-10 71.2 93 38.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-10 70.5 109 37.6
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-10 70.1 107 37.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.3e-09 68.2 149 30.2
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.1e-09 67.4 83 42.2
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-08 64.7 89 39.3
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.0e-08 63.2 124 32.3
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.0e-08 62.0 89 40.4
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 5.8e-07 59.3 71 43.7


User provided reference genes

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