Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g044440 Medicago truncatula HOM05D000123 ORTHO05D000064 2.2e-94 349.0 180 100.0
Medtr6g044430 Medicago truncatula HOM05D000123 ORTHO05D000064 9.7e-66 253.8 178 79.2
Medtr6g044340 Medicago truncatula HOM05D000123 ORTHO05D000064 5.0e-62 241.5 180 72.8
Medtr8g083100 Medicago truncatula HOM05D000123 ORTHO05D000064 4.8e-57 224.9 284 52.1
Medtr6g044350 Medicago truncatula HOM05D000123 ORTHO05D000064 3.2e-53 212.2 164 74.4
Psat7g075440 Pisum sativum HOM05D000123 ORTHO05D000064 5.2e-43 178.3 284 44.0
Ca_17986_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 8.8e-43 177.6 284 43.7
Medtr6g043060 Medicago truncatula HOM05D000123 ORTHO05D000064 8.8e-43 177.6 193 55.4
TPR.G11814 Trifolium pratense HOM05D000123 ORTHO05D000064 2.1e-36 156.4 284 41.2
arahy.Tifrunner.gnm1.ann1.Z4K8EF Arachis hypogaea HOM05D000123 ORTHO05D000064 1.2e-34 150.6 282 40.4
arahy.Tifrunner.gnm1.ann1.KQ4R6B Arachis hypogaea HOM05D000123 ORTHO05D000064 2.0e-34 149.8 282 40.4
arahy.Tifrunner.gnm1.ann1.XNB059 Arachis hypogaea HOM05D000123 ORTHO05D000064 2.0e-34 149.8 279 40.9
Lalb_Chr13g0294801 Lupinus albus HOM05D000123 ORTHO05D000064 5.7e-34 148.3 284 38.7
arahy.Tifrunner.gnm1.ann1.Q5BT9L Arachis hypogaea HOM05D000123 ORTHO05D000064 9.8e-34 147.5 282 40.1
Medtr6g044510 Medicago truncatula HOM05D000123 ORTHO05D263409 9.8e-34 147.5 103 76.7
Lalb_Chr12g0205651 Lupinus albus HOM05D000123 ORTHO05D000064 1.7e-33 146.7 284 38.7
Medtr2g100680 Medicago truncatula HOM05D000123 ORTHO05D000064 3.7e-33 145.6 271 38.7
Glyma.08G108600 Glycine max HOM05D000123 ORTHO05D000064 6.3e-33 144.8 283 40.3
Lj4g0009353 Lotus japonicus HOM05D000123 ORTHO05D000064 1.1e-32 144.1 286 40.2
Phvul.006G034200 Phaseolus vulgaris HOM05D000123 ORTHO05D000064 1.8e-32 143.3 284 39.4
VMungo0540G0571 Vigna mungo HOM05D000123 ORTHO05D000064 4.1e-32 142.1 280 40.0
Glyma.05G151800 Glycine max HOM05D000123 ORTHO05D000064 5.9e-31 138.3 283 39.6
Medtr6g044500 Medicago truncatula HOM05D000123 ORTHO05D000064 1.5e-29 133.7 94 78.7
Potri.001G320900 Populus trichocarpa HOM05D000123 ORTHO05D000064 5.4e-24 115.2 287 32.8
Potri.017G059600 Populus trichocarpa HOM05D000123 ORTHO05D000064 7.0e-24 114.8 286 32.2
Thecc.04G194400 Theobroma cacao HOM05D000123 ORTHO05D000064 1.0e-22 110.9 288 32.6
Sabra16G0203400 Salix brachista HOM05D000123 ORTHO05D000064 1.1e-21 107.5 287 30.7
Duzib151G0692 Durio zibethinus HOM05D000123 ORTHO05D000064 7.3e-21 104.8 264 33.3
Prupe.1G165500 Prunus persica HOM05D000123 ORTHO05D000064 7.3e-21 104.8 286 31.8
Cfa014965 Carpinus fangiana HOM05D000123 ORTHO05D000064 9.5e-21 104.4 281 32.4
RcHm_v2.0_Chr4g0413481 Rosa chinensis HOM05D000123 ORTHO05D000064 1.2e-20 104.0 286 31.1
Ciclev10005059m.g Citrus clementina HOM05D000123 ORTHO05D000064 1.6e-20 103.6 290 31.0
Gohir.D02G022000 Gossypium hirsutum HOM05D000123 ORTHO05D000064 2.1e-20 103.2 289 32.9
Gorai.005G027500 Gossypium raimondii HOM05D000123 ORTHO05D000064 2.1e-20 103.2 289 32.9
Dinv27196 Davidia involucrata HOM05D000123 ORTHO05D000064 2.8e-20 102.8 287 32.4
Cc03_g08510 Coffea canephora HOM05D000123 ORTHO05D000064 4.7e-20 102.1 284 32.4
Sabra17G0053300 Salix brachista HOM05D000123 ORTHO05D000064 6.1e-20 101.7 283 29.7
Haze_11657 Corylus avellana HOM05D000123 ORTHO05D000064 8.0e-20 101.3 282 31.9
Gohir.A02G018600 Gossypium hirsutum HOM05D000123 ORTHO05D000064 8.0e-20 101.3 289 31.8
Manes.15G057200 Manihot esculenta HOM05D000123 ORTHO05D000064 8.0e-20 101.3 288 30.2
Atru.chr4.1571 Acer truncatum HOM05D000123 ORTHO05D000064 1.0e-19 100.9 288 31.2
Gohir.A09G206700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 1.0e-19 100.9 273 33.0
QL06p025609 Quercus lobata HOM05D000123 ORTHO05D000064 1.8e-19 100.1 286 32.2
vmacro15569 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.8e-19 100.1 272 33.8
CSS0030426 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.3e-19 99.8 287 32.1
CSS0042244 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.3e-19 99.8 287 32.1
FAN12G2969 Fragaria x ananassa HOM05D000123 ORTHO05D000064 3.0e-19 99.4 285 29.8
Sc19g0007400 Simmondsia chinensis HOM05D000123 ORTHO05D000064 4.0e-19 99.0 269 31.2
Cpa.g.sc157.44 Carica papaya HOM05D000123 ORTHO05D000064 6.8e-19 98.2 278 30.9
FAN22G0587 Fragaria x ananassa HOM05D000123 ORTHO05D000064 8.9e-19 97.8 285 29.5
MD00G1118600 Malus domestica HOM05D000123 ORTHO05D000064 8.9e-19 97.8 286 29.0
CANSAT78G2525 Cannabis sativa HOM05D000123 ORTHO05D000064 1.2e-18 97.4 289 29.8
Medtr2g100670 Medicago truncatula HOM05D000123 ORTHO05D000064 1.5e-18 97.1 115 51.3
Rhsim02G0062200 Rhododendron simsii HOM05D000123 ORTHO05D000064 2.6e-18 96.3 271 32.5
MD04G1017400 Malus domestica HOM05D000123 ORTHO05D000064 4.4e-18 95.5 286 29.0
Gorai.006G224000 Gossypium raimondii HOM05D000123 ORTHO05D000064 5.7e-18 95.1 271 31.7
Duzib212G0765 Durio zibethinus HOM05D000123 ORTHO05D000064 7.5e-18 94.7 123 47.2
Migut.N00424 Erythranthe guttata HOM05D000123 ORTHO05D000064 7.5e-18 94.7 227 32.2
FvH4_4g13230 Fragaria vesca HOM05D000123 ORTHO05D000064 7.5e-18 94.7 285 29.5
FAN17G0204 Fragaria x ananassa HOM05D000123 ORTHO05D000064 7.5e-18 94.7 285 29.1
Nitab4.5_0001574g0140 Nicotiana tabacum HOM05D000123 ORTHO05D000064 7.5e-18 94.7 277 29.6
PGSC0003DMG400004662 Solanum tuberosum HOM05D000123 ORTHO05D000064 9.8e-18 94.4 278 30.6
Aa31LG9G3590 Aethionema arabicum HOM05D000123 ORTHO05D000064 1.7e-17 93.6 266 31.6
Solyc12g098520.2 Solanum lycopersicum HOM05D000123 ORTHO05D000064 2.2e-17 93.2 278 30.6
Gohir.D09G200300 Gossypium hirsutum HOM05D000123 ORTHO05D000064 4.9e-17 92.0 273 30.8
Peaxi162Scf00652g00018 Petunia axillaris HOM05D000123 ORTHO05D000064 6.4e-17 91.7 275 30.2
Sopen12g033300 Solanum pennellii HOM05D000123 ORTHO05D000064 6.4e-17 91.7 278 30.6
FAN07G1179 Fragaria x ananassa HOM05D000123 ORTHO05D000064 1.1e-16 90.9 280 28.6
CiPaw.01G116400 Carya illinoinensis HOM05D000123 ORTHO05D000064 1.4e-16 90.5 285 31.6
CiPaw.02G063200 Carya illinoinensis HOM05D000123 ORTHO05D000064 1.8e-16 90.1 112 48.2
PGR083G1962 Punica granatum HOM05D000123 ORTHO05D000064 1.8e-16 90.1 256 32.8
Nitab4.5_0008171g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 5.4e-16 88.6 277 28.5
Hma1.2p1_0349F.1_g132040 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 7.0e-16 88.2 123 48.0
AT4G13980 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 1.2e-15 87.4 261 31.8
CAN.G767.17 Capsicum annuum HOM05D000123 ORTHO05D000064 1.2e-15 87.4 279 29.4
Phvul.001G266300 Phaseolus vulgaris HOM05D000123 ORTHO05D000064 1.2e-15 87.4 254 33.1
AUR62029547 Chenopodium quinoa HOM05D000123 ORTHO05D000064 1.6e-15 87.0 104 48.1
Oeu050712.1 Olea europaea HOM05D000123 ORTHO05D000064 1.6e-15 87.0 260 31.5
Carub.0007s2846 Capsella rubella HOM05D000123 ORTHO05D000064 2.0e-15 86.7 267 31.1
CsaV3_3G010690 Cucumis sativus L. HOM05D000123 ORTHO05D000064 2.7e-15 86.3 284 28.9
AUR62020872 Chenopodium quinoa HOM05D000123 ORTHO05D000064 3.5e-15 85.9 104 47.1
AUR62018547 Chenopodium quinoa HOM05D000123 ORTHO05D000064 4.6e-15 85.5 104 48.1
Sed0020550 Sechium edule HOM05D000123 ORTHO05D000064 5.9e-15 85.1 284 28.2
AL7G42480 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 1.0e-14 84.3 267 30.0
EL10Ac3g07447 Beta vulgaris HOM05D000123 ORTHO05D000064 1.0e-14 84.3 278 30.9
THA.LOC104808691 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 1.0e-14 84.3 267 29.2
TWI53G0654 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 1.3e-14 84.0 287 29.3
Sp7g11770 Schrenkiella parvula HOM05D000123 ORTHO05D000064 1.7e-14 83.6 267 28.5
MSTRG.21981 Avicennia marina HOM05D000123 ORTHO05D000064 2.3e-14 83.2 109 47.7
ClCG05G003060 Citrullus lanatus HOM05D000123 ORTHO05D000064 2.3e-14 83.2 284 28.2
Eucgr.H02675 Eucalyptus grandis HOM05D000123 ORTHO05D000064 2.3e-14 83.2 286 29.0
CARHR219940 Cardamine hirsuta HOM05D000123 ORTHO05D000064 5.0e-14 82.0 269 30.1
MELO3C006288.2 Cucumis melo HOM05D000123 ORTHO05D000064 6.6e-14 81.6 133 41.4
Thhalv10025090m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 8.6e-14 81.3 264 29.2
TAR365G0203 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.1e-13 80.9 278 28.4
DCAR_026657 Daucus carota HOM05D000123 ORTHO05D000064 1.9e-13 80.1 283 29.7
Hund24427 Selenicereus undatus HOM05D000123 ORTHO05D000064 1.9e-13 80.1 104 47.1
C04p41820 Brassica napus HOM05D000123 ORTHO05D000064 7.3e-13 78.2 267 28.5
BolC4t25765H Brassica oleracea HOM05D000123 ORTHO05D000064 7.3e-13 78.2 267 28.5
BcaC02g09374 Brassica carinata HOM05D000123 ORTHO05D000064 9.5e-13 77.8 267 28.5
Oeu049052.1 Olea europaea HOM05D000123 ORTHO05D000064 1.4e-11 73.9 108 47.2
ECA248G0539 Erigeron canadensis HOM05D000123 ORTHO05D000064 1.8e-11 73.6 257 30.0
SalBow3G3655 Salvia bowleyana HOM05D000123 ORTHO05D000064 4.0e-11 72.4 109 44.0
A04p08160 Brassica napus HOM05D000123 ORTHO05D000064 5.2e-11 72.0 269 27.9
BraA04t16506Z Brassica rapa HOM05D000123 ORTHO05D000064 6.8e-11 71.6 269 27.9
ECA238G1966 Erigeron canadensis HOM05D000123 ORTHO05D000064 8.9e-11 71.2 116 42.2
VMungo1383G1332 Vigna mungo HOM05D000123 ORTHO05D000064 8.9e-11 71.2 265 30.9
SGA_v2.0_scaffold93G28354 Striga asiatica HOM05D000123 ORTHO05D000064 1.5e-10 70.5 237 29.5
BcaB02g08642 Brassica carinata HOM05D001582 ORTHO05D001598 5.8e-10 68.6 257 28.8
HanXRQChr01g0022131 Helianthus annuus HOM05D000123 ORTHO05D000064 7.5e-10 68.2 114 44.7
Lsat_1_v5_gn_1_70440 Lactuca sativa HOM05D000123 ORTHO05D000064 7.5e-10 68.2 249 28.9
Medtr6g055650 Medicago truncatula HOM05D000123 ORTHO05D000064 7.5e-10 68.2 102 49.0
Nn3g20095 Nelumbo nucifera HOM05D000123 ORTHO05D000064 9.8e-10 67.8 289 25.6
PSO063G5338 Papaver somniferum HOM05D000123 ORTHO05D000064 1.1e-08 64.3 261 26.4
HanXRQChr11g0344441 Helianthus annuus HOM05D000123 ORTHO05D000064 3.2e-08 62.8 237 32.1
Aqoxy2G03924 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 1.2e-07 60.8 278 25.2
PSO017G2930 Papaver somniferum HOM05D000123 ORTHO05D000064 2.0e-07 60.1 283 27.6
TPR.G25375 Trifolium pratense HOM05D000123 ORTHO05D000064 6.0e-07 58.5 121 39.7
TAR636G0265 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.0e-06 57.8 116 37.1
MBI07_g08881_MAGBIO Magnolia biondii HOM05D000123 ORTHO05D000064 1.3e-06 57.4 107 38.3
Medtr6g055660 Medicago truncatula HOM05D000123 ORTHO05D000064 5.0e-06 55.5 36 72.2


User provided reference genes

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