Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g042010 Medicago truncatula HOM05D004022 ORTHO05D004090 1.8e-57 225.7 114 100.0
TPR.G19691 Trifolium pratense HOM05D004022 ORTHO05D004090 4.6e-29 131.3 114 68.4
Psat1g075360 Pisum sativum HOM05D004022 ORTHO05D004090 2.5e-27 125.6 115 67.8
Medtr6g041990 Medicago truncatula HOM05D004022 ORTHO05D004090 5.6e-27 124.4 95 70.5
Lalb_Chr19g0133591 Lupinus albus HOM05D004022 ORTHO05D004090 4.9e-15 84.7 108 50.9
Lj3g0000459 Lotus japonicus HOM05D004022 ORTHO05D004090 5.4e-14 81.3 110 50.0
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 9.3e-14 80.5 107 44.9
Lj3g0019101 Lotus japonicus HOM05D004022 ORTHO05D004090 6.7e-12 74.3 105 47.6
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 6.7e-12 74.3 105 45.7
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 3.3e-11 72.0 105 45.7
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 4.3e-11 71.6 105 47.6
TPR.G2234 Trifolium pratense HOM05D004022 ORTHO05D004090 1.3e-10 70.1 105 43.8
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 1.6e-10 69.7 105 46.7
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 3.6e-10 68.6 106 46.2
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 3.1e-09 65.5 105 44.8
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 4.5e-08 61.6 44 70.5
arahy.Tifrunner.gnm1.ann1.NFB54Z Arachis hypogaea HOM05D004022 ORTHO05D004090 7.6e-08 60.8 44 70.5
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 1.7e-07 59.7 98 42.9
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.8e-07 58.5 44 68.2
Migut.M00647 Erythranthe guttata HOM05D004022 ORTHO05D004090 6.4e-07 57.8 45 66.7
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 6.4e-07 57.8 98 41.8
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 1.1e-06 57.0 95 41.1
CANSAT56G3333 Cannabis sativa HOM05D004022 ORTHO05D004090 1.4e-06 56.6 97 42.3
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 1.4e-06 56.6 40 67.5
Cfa019453 Carpinus fangiana HOM05D004022 ORTHO05D004090 1.9e-06 56.2 92 41.3
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 2.4e-06 55.8 92 41.3
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 2.4e-06 55.8 56 57.1
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 2.4e-06 55.8 39 71.8
CSS0046120 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 3.2e-06 55.5 52 55.8
CiPaw.09G122900 Carya illinoinensis HOM05D004022 ORTHO05D004090 3.2e-06 55.5 99 37.4
DCAR_013798 Daucus carota HOM05D057188 ORTHO05D004090 3.2e-06 55.5 43 58.1
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 3.2e-06 55.5 95 38.9
HanXRQChr11g0330361 Helianthus annuus HOM05D004022 ORTHO05D004090 4.2e-06 55.1 34 79.4
Nitab4.5_0005080g0020 Nicotiana tabacum HOM05D004022 ORTHO05D004090 5.5e-06 54.7 41 61.0
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 7.1e-06 54.3 35 77.1
TWI38G0355 Tripterygium wilfordii HOM05D004022 ORTHO05D004090 7.1e-06 54.3 93 40.9
Dinv26665 Davidia involucrata HOM05D004022 ORTHO05D004090 9.3e-06 53.9 34 73.5
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 9.3e-06 53.9 35 74.3
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 9.3e-06 53.9 35 74.3


User provided reference genes

Program Settings