Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g038610 Medicago truncatula HOM05D005989 ORTHO05D000022 2.6e-39 164.9 79 100.0
TPR.G13740 Trifolium pratense HOM05D005989 ORTHO05D000022 1.8e-11 72.4 54 57.4
Medtr6g061220 Medicago truncatula HOM05D005989 ORTHO05D000022 6.7e-11 70.5 61 52.5
Medtr2g033485 Medicago truncatula HOM05D005989 ORTHO05D000022 1.3e-09 66.2 44 65.9
TPR.G23861 Trifolium pratense HOM05D005989 ORTHO05D000022 1.6e-09 65.9 72 43.1
Medtr7g035440 Medicago truncatula HOM05D005989 ORTHO05D000022 6.2e-09 63.9 42 64.3
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 6.2e-09 63.9 61 42.6
Psat2g155160 Pisum sativum HOM05D005989 ORTHO05D000022 1.8e-08 62.4 59 44.1
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 1.8e-08 62.4 46 50.0
Lalb_Chr08g0232201 Lupinus albus HOM05D005989 ORTHO05D000022 2.4e-08 62.0 43 53.5
Medtr1g110910 Medicago truncatula HOM05D005989 ORTHO05D000022 2.4e-08 62.0 55 49.1
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 6.9e-08 60.5 53 43.4
TPR.G3914 Trifolium pratense HOM05D005989 ORTHO05D000022 6.9e-08 60.5 45 62.2
Medtr1g059640 Medicago truncatula HOM05D005989 ORTHO05D000022 9.0e-08 60.1 43 60.5
RcHm_v2.0_Chr2g0119161 Rosa chinensis HOM05D005989 ORTHO05D000022 9.0e-08 60.1 51 47.1
TPR.G15449 Trifolium pratense HOM05D005989 ORTHO05D000022 9.0e-08 60.1 47 59.6
Medtr6g071310 Medicago truncatula HOM05D005989 ORTHO05D000022 1.2e-07 59.7 49 49.0
Medtr3g081100 Medicago truncatula HOM05D005989 ORTHO05D000022 2.0e-07 58.9 44 61.4
TPR.G40388 Trifolium pratense HOM05D005989 ORTHO05D000022 2.0e-07 58.9 69 46.4
TPR.G18660 Trifolium pratense HOM05D005989 ORTHO05D000022 2.6e-07 58.5 52 44.2
Glyma.13G358333 Glycine max HOM05D005989 ORTHO05D000022 4.5e-07 57.8 40 60.0
Psat4g109600 Pisum sativum HOM05D000351 ORTHO05D000250 4.5e-07 57.8 61 39.3
Psat1g101960 Pisum sativum HOM05D000003 ORTHO05D000007 9.9e-07 56.6 44 50.0
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 1.3e-06 56.2 60 43.3
Lalb_Chr18g0052711 Lupinus albus HOM05D005989 ORTHO05D000022 1.7e-06 55.8 54 44.4
Prupe.1G484600 Prunus persica HOM05D005989 ORTHO05D000022 1.7e-06 55.8 56 39.3
Prupe.4G283800 Prunus persica HOM05D005989 ORTHO05D000651 1.7e-06 55.8 69 36.2
Medtr2g062550 Medicago truncatula HOM05D002545 ORTHO05D002335 2.9e-06 55.1 41 56.1
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 2.9e-06 55.1 54 38.9
TPR.G6692 Trifolium pratense HOM05D005989 ORTHO05D000022 2.9e-06 55.1 50 44.0
TPR.G36653 Trifolium pratense HOM05D000003 ORTHO05D000006 3.8e-06 54.7 39 56.4
Medtr6g055090 Medicago truncatula HOM05D005989 ORTHO05D000022 4.9e-06 54.3 43 53.5
RcHm_v2.0_Chr2g0120021 Rosa chinensis HOM05D005989 ORTHO05D000022 4.9e-06 54.3 56 37.5
RcHm_v2.0_Chr6g0299951 Rosa chinensis HOM05D005989 ORTHO05D000022 6.4e-06 53.9 54 37.0
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 8.4e-06 53.5 54 40.7
Psat0s1775g0320 Pisum sativum HOM05D005989 ORTHO05D000022 8.4e-06 53.5 46 45.7
RcHm_v2.0_Chr1g0316991 Rosa chinensis HOM05D005989 ORTHO05D000022 8.4e-06 53.5 54 38.9


User provided reference genes

Program Settings