Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-92 342.4 176 100.0
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-52 208.4 170 62.4
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 1.2e-47 193.7 171 57.9
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.7e-46 189.9 172 58.1
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 3.7e-46 188.7 171 59.1
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.4e-45 186.0 174 55.7
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-44 182.6 170 54.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 1.0e-43 180.6 171 55.0
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 1.0e-43 180.6 171 55.0
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.1e-40 170.6 174 51.7
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 1.8e-40 169.9 168 54.2
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 2.9e-38 162.5 168 51.2
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 1.1e-37 160.6 167 50.3
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 2.7e-36 156.0 174 47.1
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-34 150.6 174 49.4
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 2.5e-34 149.4 175 50.9
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 9.5e-34 147.5 175 48.6
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 6.2e-33 144.8 173 42.8
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 6.2e-33 144.8 173 42.8
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 1.1e-32 144.1 153 48.4
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-32 143.7 174 43.1
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 4.0e-32 142.1 177 45.8
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 6.4e-30 134.8 176 42.6
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 8.4e-30 134.4 174 40.8
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.1e-29 134.0 180 44.4
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 2.1e-28 129.8 172 45.3
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 2.7e-28 129.4 173 45.1
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 6.0e-28 128.3 187 41.7
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 6.0e-28 128.3 174 46.6
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 1.0e-27 127.5 173 43.9
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 1.3e-27 127.1 185 42.7
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.7e-27 126.7 186 39.8
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.3e-27 126.3 173 43.4
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 2.5e-26 122.9 180 40.6
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-26 122.1 174 43.1
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-25 120.6 177 42.4
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 3.6e-25 119.0 185 40.5
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 3.6e-25 119.0 186 37.6
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 4.7e-25 118.6 129 45.7
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 6.2e-25 118.2 169 37.3
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-24 117.5 129 44.2
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 3.1e-24 115.9 176 38.6
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 4.0e-24 115.5 169 40.2
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 4.0e-24 115.5 169 40.2
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-23 114.0 104 54.8
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 1.5e-23 113.6 176 39.8
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-23 112.5 175 40.6
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-23 112.5 144 41.7
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 5.8e-23 111.7 163 41.7
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 9.9e-23 110.9 147 42.9
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 9.9e-23 110.9 147 42.9
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-22 107.8 170 38.8
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 1.4e-21 107.1 151 40.4
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 1.4e-21 107.1 175 40.0
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 1.4e-21 107.1 176 35.8
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 1.9e-21 106.7 155 36.8
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 2.4e-21 106.3 169 36.7
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 3.2e-21 105.9 151 39.7
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 1.2e-20 104.0 155 36.8
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.6e-20 103.6 166 36.1
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 2.1e-20 103.2 155 36.8
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 2.1e-20 103.2 155 36.8
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 2.1e-20 103.2 155 36.8
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 2.1e-20 103.2 155 36.8
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-20 102.1 174 36.8
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 7.8e-20 101.3 111 45.9
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 8.7e-19 97.8 169 37.9
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-18 97.1 181 36.5
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-18 96.7 165 37.0
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 3.3e-18 95.9 161 37.3
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-18 95.9 99 48.5
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 9.6e-18 94.4 172 36.6
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 1.3e-17 94.0 174 34.5
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 1.3e-17 94.0 103 44.7
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 1.6e-17 93.6 174 35.1
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-17 93.2 181 36.5
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 2.8e-17 92.8 128 38.3
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 2.8e-17 92.8 178 38.8
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 2.8e-17 92.8 170 35.9
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 3.6e-17 92.4 176 35.8
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 6.2e-17 91.7 181 34.8
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 8.1e-17 91.3 164 37.2
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 1.8e-16 90.1 163 35.0
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 1.8e-16 90.1 146 34.9
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 6.9e-16 88.2 174 32.2
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.2e-15 87.4 164 36.0
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.2e-15 87.4 163 35.6
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-15 87.4 181 33.7
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 1.5e-15 87.0 168 32.7
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 3.4e-15 85.9 170 33.5
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 5.8e-15 85.1 174 36.2
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 5.8e-15 85.1 180 32.8
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 2.2e-14 83.2 174 31.0
Lalb_Chr14g0362601 Lupinus albus HOM05D004894 ORTHO05D005689 6.4e-14 81.6 103 39.8
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 3.2e-13 79.3 108 41.7
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 4.2e-13 79.0 157 30.6
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 4.2e-13 79.0 179 33.5
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 9.3e-13 77.8 150 34.0
TPR.G30770 Trifolium pratense HOM05D004894 ORTHO05D005689 9.3e-13 77.8 166 33.7
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 1.2e-12 77.4 130 36.9
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 2.1e-12 76.6 176 32.4
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 2.7e-12 76.3 150 31.3
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 123 39.8
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-12 76.3 171 35.1
Lalb_Chr15g0089571 Lupinus albus HOM05D004894 ORTHO05D005689 6.0e-12 75.1 185 31.4
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 7.9e-12 74.7 175 34.3
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.8e-11 73.6 152 33.6
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 3.0e-11 72.8 147 30.6
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 6.7e-11 71.6 152 32.2
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.1e-10 70.9 152 31.6
SalBow3G0814 Salvia bowleyana HOM05D011489 ORTHO05D014472 3.3e-10 69.3 133 33.1
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 5.6e-10 68.6 175 33.7
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 7.4e-10 68.2 115 37.4
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-09 67.0 173 32.4
SalBow7G3249 Salvia bowleyana HOM05D011489 ORTHO05D014472 8.1e-09 64.7 170 28.8
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 1.5e-07 60.5 171 29.8
Oeu061438.1 Olea europaea HOM05D011489 ORTHO05D014472 1.5e-07 60.5 182 30.8
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 2.0e-07 60.1 148 32.4
SGA_v2.0_scaffold108G30878 Striga asiatica HOM05D011489 ORTHO05D014472 2.6e-07 59.7 176 29.0
Gohir.A05G245150 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.9e-06 56.2 151 29.1
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 2.9e-06 56.2 147 29.3
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 3.8e-06 55.8 169 27.2
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 4.9e-06 55.5 143 28.7
Sopen04g027820 Solanum pennellii HOM05D016682 ORTHO05D013826 6.4e-06 55.1 140 29.3


User provided reference genes

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