Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-88 329.7 173 100.0
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-35 152.5 165 51.5
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 1.4e-34 150.2 171 47.4
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-33 146.0 165 47.3
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 8.8e-32 141.0 159 46.5
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 3.7e-30 135.6 166 42.8
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 4.1e-29 132.1 166 44.6
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 2.9e-27 125.9 170 42.9
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 6.5e-27 124.8 166 42.8
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 2.5e-26 122.9 165 41.8
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-25 120.2 170 44.7
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-25 119.8 167 40.1
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 1.8e-24 116.7 167 38.3
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 2.6e-23 112.8 168 39.9
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 1.7e-22 110.2 168 42.9
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 4.8e-22 108.6 167 38.3
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 1.4e-21 107.1 156 44.2
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 4.1e-21 105.5 162 39.5
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 4.1e-21 105.5 168 40.5
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 5.3e-21 105.1 163 36.2
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-20 104.0 167 38.3
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.6e-20 103.6 160 37.5
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.0e-20 103.2 162 39.5
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 3.5e-20 102.4 162 41.4
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 5.9e-20 101.7 166 39.2
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-19 100.5 167 38.3
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 1.7e-19 100.1 163 38.7
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 1.7e-19 100.1 163 38.7
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.2e-19 99.8 167 39.5
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 2.2e-19 99.8 166 33.1
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 2.2e-19 99.8 166 33.1
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-19 99.8 145 39.3
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 3.8e-19 99.0 165 38.2
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 5.0e-19 98.6 164 39.6
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.2e-18 95.9 160 35.6
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 5.5e-18 95.1 166 36.7
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 7.2e-18 94.7 166 38.0
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 7.2e-18 94.7 166 35.5
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 9.4e-18 94.4 160 36.9
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-17 93.6 166 40.4
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-17 93.2 159 36.5
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 2.1e-17 93.2 146 39.0
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-17 92.8 166 34.9
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 4.7e-17 92.0 165 37.0
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.0e-16 90.9 121 42.1
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 2.3e-16 89.7 168 36.3
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 4.0e-16 89.0 168 32.7
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 1.5e-15 87.0 161 36.6
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 3.4e-15 85.9 141 36.2
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.7e-14 83.6 145 35.2
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 2.2e-14 83.2 142 35.9
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 8.3e-14 81.3 166 33.7
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.1e-13 80.9 178 36.5
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 1.8e-13 80.1 164 34.1
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 3.1e-13 79.3 130 37.7
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 4.1e-13 79.0 151 36.4
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 4.1e-13 79.0 148 33.8
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 5.4e-13 78.6 150 33.3
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 9.1e-13 77.8 145 35.9
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 9.1e-13 77.8 102 40.2
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 2.0e-12 76.6 172 31.4
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 1.0e-11 74.3 160 33.1
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.7e-11 73.6 164 34.1
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.7e-11 73.6 164 34.1
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.7e-11 73.6 164 34.1
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.7e-11 73.6 164 34.1
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.2e-11 73.2 166 33.1
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.9e-11 72.8 164 33.5
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 5.0e-11 72.0 176 30.7
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 6.5e-11 71.6 170 31.2
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 6.5e-11 71.6 170 31.2
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 1.5e-10 70.5 126 36.5
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.5e-10 70.5 153 37.9
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 1.5e-10 70.5 131 32.1
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-10 70.1 178 33.7
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 2.5e-10 69.7 103 36.9
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 4.2e-10 68.9 176 30.7
Lalb_Chr19g0125741 Lupinus albus HOM05D067330 ORTHO05D005689 2.1e-09 66.6 149 31.5
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 2.1e-09 66.6 145 31.0
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 2.7e-09 66.2 139 32.4
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 3.6e-09 65.9 168 29.8
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 8.0e-09 64.7 176 28.4
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.4e-08 63.9 149 30.2
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 4.0e-08 62.4 151 29.1
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 1.2e-07 60.8 165 29.7
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.0e-07 60.1 173 28.9
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-07 59.3 176 29.5
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-07 59.3 176 29.5
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 4.4e-07 58.9 175 29.1
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 5.7e-07 58.5 141 29.8
Migut.C00972 Erythranthe guttata HOM05D011489 ORTHO05D005689 9.8e-07 57.8 172 29.1
Migut.C00970 Erythranthe guttata HOM05D011489 ORTHO05D005689 1.7e-06 57.0 128 35.2
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 1.7e-06 57.0 149 28.9
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 1.7e-06 57.0 145 29.0
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 2.2e-06 56.6 170 28.8
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 3.7e-06 55.8 128 27.3
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 4.9e-06 55.5 165 27.3


User provided reference genes

Program Settings