Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-139 497.7 255 100.0
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-37 161.0 152 55.9
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 2.2e-31 140.2 158 50.0
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 9.3e-30 134.8 157 47.1
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-29 134.0 159 42.8
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 1.0e-28 131.3 161 44.7
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 5.1e-28 129.0 155 45.8
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 5.1e-28 129.0 160 43.1
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-27 127.9 158 46.8
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-26 123.6 156 44.2
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 2.6e-24 116.7 155 42.6
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 7.6e-24 115.2 154 40.9
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-22 111.3 156 44.2
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-22 109.8 163 36.8
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-19 99.8 161 37.3
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 7.4e-19 98.6 154 37.7
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 1.3e-18 97.8 160 36.9
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 3.7e-18 96.3 156 39.7
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-17 94.7 165 35.8
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 3.4e-16 89.7 150 35.3
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 3.4e-16 89.7 154 35.1
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.9e-15 85.9 149 34.2
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 7.1e-14 82.0 149 34.2
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-13 81.3 147 33.3
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-13 81.3 155 32.9
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-13 80.1 146 34.9
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 2.3e-12 77.0 165 30.9
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 2.3e-12 77.0 153 31.4
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 3.0e-12 76.6 166 33.7
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 5.1e-12 75.9 165 29.7
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-11 74.3 174 33.3
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-11 74.3 174 33.3
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-11 72.8 148 34.5
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 9.6e-11 71.6 162 34.6
Medtr7g053440 Medicago truncatula HOM05D013181 ORTHO05D263927 1.6e-10 70.9 42 85.7
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 3.7e-10 69.7 141 29.8
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 6.3e-10 68.9 168 35.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-09 68.2 150 29.3
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-09 68.2 150 29.3
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 2.4e-09 67.0 139 34.5
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 2.4e-09 67.0 160 36.2
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 4.1e-09 66.2 149 35.6
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 6.9e-09 65.5 167 28.7
Medtr1g080420 Medicago truncatula HOM05D000104 ORTHO05D006397 9.0e-09 65.1 48 70.8
Medtr6g022670 Medicago truncatula HOM05D013181 ORTHO05D000528 1.2e-08 64.7 42 78.6
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.6e-08 63.5 154 29.9
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 2.6e-08 63.5 136 31.6
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.6e-08 63.5 159 31.4
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.6e-08 63.5 148 34.5
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 5.8e-08 62.4 170 30.0
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 1.7e-07 60.8 144 32.6
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.7e-07 60.8 164 31.7
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 1.7e-07 60.8 147 32.0
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 2.2e-07 60.5 159 28.3
Migut.C00970 Erythranthe guttata HOM05D011489 ORTHO05D005689 2.9e-07 60.1 149 27.5
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 3.8e-07 59.7 142 28.9
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 5.0e-07 59.3 119 31.1
Medtr5g012750 Medicago truncatula HOM05D013181 ORTHO05D266008 5.0e-07 59.3 31 87.1
Medtr2g073150 Medicago truncatula HOM05D013181 ORTHO05D260345 8.4e-07 58.5 31 83.9
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.4e-06 57.8 150 28.0
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 1.4e-06 57.8 126 31.7
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.5e-06 57.0 155 31.0
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 4.2e-06 56.2 147 28.6
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 4.2e-06 56.2 147 28.6
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 9.3e-06 55.1 158 26.6


User provided reference genes

Program Settings