Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-94 349.7 177 100.0
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 7.8e-44 181.0 179 54.2
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 3.3e-34 149.1 180 47.2
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 5.6e-34 148.3 178 44.4
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-29 133.3 178 43.8
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-29 132.5 159 42.8
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-25 120.6 180 42.8
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 6.2e-25 118.2 162 42.6
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 9.0e-24 114.4 169 40.2
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 9.0e-24 114.4 178 41.6
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 2.6e-23 112.8 179 39.7
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 3.4e-23 112.5 179 39.7
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 7.6e-23 111.3 170 41.2
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 1.0e-22 110.9 176 39.8
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 3.8e-22 109.0 182 37.9
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 5.5e-21 105.1 166 36.7
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 7.1e-21 104.8 167 38.3
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 2.7e-20 102.8 176 36.9
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-20 102.1 167 36.5
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-19 100.5 170 37.1
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-17 93.2 176 36.9
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 4.8e-17 92.0 171 35.7
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 1.4e-16 90.5 183 35.5
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.6e-15 86.3 177 36.2
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 5.8e-15 85.1 185 34.6
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 5.8e-15 85.1 173 34.1
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-15 84.7 176 31.8
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-15 84.7 179 32.4
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-15 84.7 179 32.4
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.0e-14 84.3 175 33.7
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-14 82.8 184 33.2
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-14 82.8 175 35.4
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 3.8e-14 82.4 178 33.1
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 3.8e-14 82.4 178 34.3
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 5.0e-14 82.0 177 33.3
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 5.0e-14 82.0 176 36.9
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 5.0e-14 82.0 183 33.3
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 6.5e-14 81.6 152 32.9
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 1.1e-13 80.9 177 34.5
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 4.2e-13 79.0 129 37.2
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 9.3e-13 77.8 170 34.1
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 9.3e-13 77.8 170 34.1
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.2e-12 77.4 173 33.5
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 1.6e-12 77.0 177 32.8
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-12 77.0 152 32.2
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.1e-12 76.6 177 34.5
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 7.9e-12 74.7 170 29.4
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 1.0e-11 74.3 144 33.3
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 1.8e-11 73.6 177 32.8
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 1.8e-11 73.6 148 29.1
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 2.3e-11 73.2 177 30.5
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-11 73.2 131 32.8
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-11 73.2 131 32.8
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 3.0e-11 72.8 175 32.6
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 3.0e-11 72.8 169 31.4
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.5e-10 70.5 173 28.9
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 1.9e-10 70.1 174 31.6
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.9e-10 70.1 170 32.4
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-10 69.3 131 32.1
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 5.7e-10 68.6 175 32.0
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 5.7e-10 68.6 189 32.3
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 5.7e-10 68.6 179 31.8
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-10 68.2 131 34.4
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 1.6e-09 67.0 173 30.6
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.2e-09 66.6 136 31.6
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 2.8e-09 66.2 127 31.5
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.8e-09 66.2 170 28.8
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 2.8e-09 66.2 168 31.5
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 4.8e-09 65.5 170 28.8
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 4.8e-09 65.5 170 28.8
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 4.8e-09 65.5 170 28.8
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 4.8e-09 65.5 170 28.8
TPR.G30772 Trifolium pratense HOM05D004894 ORTHO05D005689 6.3e-09 65.1 177 29.4
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 5.3e-08 62.0 124 32.3
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 4.5e-07 58.9 151 29.8
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 4.5e-07 58.9 180 30.0
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 5.9e-07 58.5 170 28.2


User provided reference genes

Program Settings