Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-95 352.4 177 100.0
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 6.0e-60 234.6 180 66.1
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 5.6e-58 228.0 181 67.4
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 1.9e-42 176.4 179 51.4
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 4.9e-38 161.8 171 51.5
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 8.4e-38 161.0 179 50.8
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 2.5e-34 149.4 178 45.5
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-34 148.7 179 45.3
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 3.1e-32 142.5 166 42.8
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 3.1e-32 142.5 177 45.8
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-31 139.0 179 43.0
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-30 136.3 174 41.4
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-29 131.7 177 41.2
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-28 130.6 174 41.4
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-28 130.2 155 45.8
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 6.0e-28 128.3 171 43.3
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-27 126.3 177 40.7
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-27 126.3 168 43.5
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 2.5e-26 122.9 180 42.8
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 5.6e-26 121.7 180 40.6
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.7e-20 102.8 176 39.2
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 5.7e-18 95.1 161 36.0
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 5.7e-18 95.1 175 36.6
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-18 94.7 176 35.8
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 2.4e-16 89.7 169 33.1
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 5.3e-16 88.6 178 36.0
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 9.0e-16 87.8 169 33.7
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 9.0e-16 87.8 169 33.7
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-15 87.4 149 34.2
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-15 85.9 174 33.9
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 4.5e-15 85.5 166 33.1
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 3.8e-14 82.4 167 32.9
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-13 80.5 176 33.5
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 3.2e-13 79.3 189 31.7
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 5.5e-13 78.6 167 32.3
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 7.2e-13 78.2 171 32.7
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 7.2e-13 78.2 180 32.2
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 9.3e-13 77.8 189 32.8
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 1.6e-12 77.0 167 32.9
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.6e-12 77.0 177 34.5
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 172 32.0
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 172 32.0
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-12 76.3 175 34.3
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 6.1e-12 75.1 178 30.9
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 6.1e-12 75.1 167 32.9
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 7.9e-12 74.7 167 31.1
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 3.3e-10 69.3 169 31.4
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 7.4e-10 68.2 177 32.8
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.6e-09 67.0 180 29.4
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 3.1e-08 62.8 175 25.7
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 5.3e-08 62.0 143 32.2
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.5e-07 60.5 143 31.5
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.6e-07 59.7 169 27.8


User provided reference genes

Program Settings