Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g036940 Medicago truncatula HOM05D008118 ORTHO05D011003 3.6e-118 428.3 226 100.0
Medtr1g036730 Medicago truncatula HOM05D008118 ORTHO05D011003 1.0e-64 250.8 201 67.2
Medtr5g009790 Medicago truncatula HOM05D008118 ORTHO05D011003 4.5e-60 235.3 221 58.8
Medtr2g083590 Medicago truncatula HOM05D008118 ORTHO05D011003 1.0e-59 234.2 200 60.5
Medtr5g053480 Medicago truncatula HOM05D008118 ORTHO05D011003 8.4e-59 231.1 200 61.0
Medtr5g072370 Medicago truncatula HOM05D008118 ORTHO05D011003 8.7e-56 221.1 197 58.9
Medtr5g044895 Medicago truncatula HOM05D008118 ORTHO05D011003 2.1e-54 216.5 197 58.4
Medtr8g470030 Medicago truncatula HOM05D008118 ORTHO05D011003 4.1e-53 212.2 197 56.9
Medtr0005s0220 Medicago truncatula HOM05D008118 ORTHO05D011003 1.5e-52 210.3 197 56.9
Medtr5g067630 Medicago truncatula HOM05D008118 ORTHO05D011003 1.5e-52 210.3 197 56.9
Medtr1g053405 Medicago truncatula HOM05D008118 ORTHO05D257646 1.0e-51 207.6 114 89.5
Medtr5g063995 Medicago truncatula HOM05D008118 ORTHO05D011003 3.8e-51 205.7 197 55.8
Medtr2g058650 Medicago truncatula HOM05D008118 ORTHO05D011003 5.0e-51 205.3 197 55.8
Medtr3g028620 Medicago truncatula HOM05D008118 ORTHO05D011003 6.5e-51 204.9 197 55.8
Medtr6g043270 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-50 204.1 197 56.3
Medtr6g042710 Medicago truncatula HOM05D008118 ORTHO05D011003 3.5e-49 199.1 171 61.4
Medtr7g051090 Medicago truncatula HOM05D008118 ORTHO05D011003 5.1e-48 195.3 171 60.8
Medtr4g022300 Medicago truncatula HOM05D008118 ORTHO05D262149 1.5e-47 193.7 106 89.6
Medtr8g466300 Medicago truncatula HOM05D008118 ORTHO05D011003 1.5e-47 193.7 179 57.5
Medtr4g045603 Medicago truncatula HOM05D008118 ORTHO05D011003 5.7e-47 191.8 197 53.3
Medtr3g060830 Medicago truncatula HOM05D008118 ORTHO05D011003 2.2e-46 189.9 197 53.3
Medtr7g061620 Medicago truncatula HOM05D008118 ORTHO05D011003 3.1e-45 186.0 197 52.3
Medtr1g052845 Medicago truncatula HOM05D008118 ORTHO05D261005 5.3e-45 185.3 161 62.1
Medtr7g061360 Medicago truncatula HOM05D008118 ORTHO05D011003 2.6e-44 183.0 197 52.3
Medtr5g080380 Medicago truncatula HOM05D008118 ORTHO05D011003 3.4e-44 182.6 160 60.6
Medtr0214s0030 Medicago truncatula HOM05D008118 ORTHO05D011003 1.7e-43 180.3 176 54.5
Medtr0083s0070 Medicago truncatula HOM05D008118 ORTHO05D011003 4.2e-42 175.6 176 54.0
Medtr0360s0010 Medicago truncatula HOM05D008118 ORTHO05D011003 7.9e-41 171.4 179 52.5
TPR.G20486 Trifolium pratense HOM05D008118 ORTHO05D012883 1.1e-39 167.5 198 50.5
Medtr5g048800 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-37 161.0 176 51.7
Medtr4g061900 Medicago truncatula HOM05D008118 ORTHO05D260629 4.1e-37 159.1 150 57.3
Medtr2g061240 Medicago truncatula HOM05D008118 ORTHO05D011003 6.9e-37 158.3 158 53.8
Medtr7g056780 Medicago truncatula HOM05D008118 ORTHO05D011003 6.9e-37 158.3 146 56.8
Medtr8g075640 Medicago truncatula HOM05D008118 ORTHO05D266095 9.1e-37 157.9 88 86.4
Medtr3g033840 Medicago truncatula HOM05D008118 ORTHO05D011003 2.0e-36 156.8 169 52.1
TPR.G20344 Trifolium pratense HOM05D008118 ORTHO05D012883 3.4e-36 156.0 182 51.6
Medtr7g055890 Medicago truncatula HOM05D008118 ORTHO05D011003 1.3e-35 154.1 199 47.2
Medtr4g069290 Medicago truncatula HOM05D008118 ORTHO05D011003 3.8e-35 152.5 198 45.5
Medtr4g054700 Medicago truncatula HOM05D008118 ORTHO05D011003 1.2e-33 147.5 156 52.6
TPR.G7248 Trifolium pratense HOM05D008118 ORTHO05D012883 2.1e-33 146.7 158 53.2
Medtr3g034000 Medicago truncatula HOM05D008118 ORTHO05D011003 4.4e-31 139.0 99 68.7
Medtr0520s0020 Medicago truncatula HOM05D008118 ORTHO05D011003 3.5e-28 129.4 136 52.9
Medtr5g084150 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-26 124.4 125 52.0
Medtr5g055710 Medicago truncatula HOM05D008118 ORTHO05D011003 2.5e-26 123.2 138 50.0
TPR.G10682 Trifolium pratense HOM05D008118 ORTHO05D012883 3.3e-23 112.8 129 51.9
Medtr8g479440 Medicago truncatula HOM05D008118 ORTHO05D011003 2.2e-22 110.2 126 50.8
TPR.G40598 Trifolium pratense HOM05D008118 ORTHO05D012883 3.7e-22 109.4 129 48.8
Medtr6g044850 Medicago truncatula HOM05D008118 ORTHO05D011003 4.8e-22 109.0 121 51.2
TPR.G36322 Trifolium pratense HOM05D008118 ORTHO05D012883 4.8e-22 109.0 129 50.4
TPR.G39459 Trifolium pratense HOM05D008118 ORTHO05D012883 1.4e-21 107.5 129 49.6
TPR.G28107 Trifolium pratense HOM05D000150 ORTHO05D000108 5.3e-21 105.5 132 46.2
TPR.G27560 Trifolium pratense HOM05D008118 ORTHO05D012883 7.0e-21 105.1 125 48.8
TPR.G35170 Trifolium pratense HOM05D008118 ORTHO05D012883 2.7e-20 103.2 115 52.2
TPR.G25 Trifolium pratense HOM05D008118 ORTHO05D012883 1.0e-19 101.3 113 53.1
TPR.G40625 Trifolium pratense HOM05D008118 ORTHO05D012883 1.3e-19 100.9 104 53.8
Medtr6g466390 Medicago truncatula HOM05D008118 ORTHO05D011003 2.9e-19 99.8 99 54.5
TPR.G21336 Trifolium pratense HOM05D008118 ORTHO05D012883 2.9e-19 99.8 129 45.7
Medtr4g026610 Medicago truncatula HOM05D008118 ORTHO05D012883 3.8e-19 99.4 87 55.2
TPR.G39906 Trifolium pratense HOM05D008118 ORTHO05D012883 2.5e-18 96.7 116 45.7
TPR.G35807 Trifolium pratense HOM05D008118 ORTHO05D012883 9.4e-18 94.7 116 45.7
TPR.G17660 Trifolium pratense HOM05D008118 ORTHO05D012883 3.6e-17 92.8 103 51.5
TPR.G20369 Trifolium pratense HOM05D008118 ORTHO05D012883 7.5e-15 85.1 86 55.8
TPR.G31543 Trifolium pratense HOM05D008118 ORTHO05D012883 2.2e-14 83.6 101 47.5
TPR.G40015 Trifolium pratense HOM05D008118 ORTHO05D012883 2.4e-13 80.1 91 48.4
TPR.G973 Trifolium pratense HOM05D008118 ORTHO05D012883 9.1e-13 78.2 58 60.3
Medtr3g117535 Medicago truncatula HOM05D008118 ORTHO05D011003 2.3e-08 63.5 102 40.2
Medtr3g034005 Medicago truncatula HOM05D008118 ORTHO05D011003 8.8e-08 61.6 70 47.1
TPR.G13418 Trifolium pratense HOM05D008118 ORTHO05D411863 8.3e-06 55.1 90 36.7


User provided reference genes

Program Settings