Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 4.1e-49 198.0 118 100.0
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 5.2e-36 154.5 118 78.8
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.9e-33 146.0 121 77.7
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.4e-28 129.8 125 64.0
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 6.9e-28 127.5 121 66.1
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.5e-27 126.3 125 68.8
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.5e-27 126.3 120 64.2
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 2.0e-27 125.9 126 65.1
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 3.4e-27 125.2 118 60.2
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 3.4e-27 125.2 122 63.9
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 7.6e-27 124.0 121 62.8
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 7.6e-27 124.0 120 65.0
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 9.9e-27 123.6 120 70.0
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 1.3e-26 123.2 128 64.8
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 3.8e-26 121.7 119 58.0
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 3.8e-26 121.7 128 60.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 3.8e-26 121.7 126 69.8
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 4.9e-26 121.3 118 64.4
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 4.9e-26 121.3 130 63.1
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 8.4e-26 120.6 120 68.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 8.4e-26 120.6 134 64.2
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 3.2e-25 118.6 129 62.0
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.2e-25 118.6 121 62.8
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 4.2e-25 118.2 119 68.1
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 5.4e-25 117.9 123 64.2
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 9.3e-25 117.1 121 62.0
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 9.3e-25 117.1 121 62.0
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.6e-24 116.3 124 63.7
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.6e-24 116.3 119 61.3
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 1.6e-24 116.3 123 56.1
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 2.1e-24 115.9 125 60.0
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 2.7e-24 115.5 124 61.3
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 2.7e-24 115.5 121 63.6
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 3.5e-24 115.2 122 55.7
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 4.6e-24 114.8 119 66.4
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 6.0e-24 114.4 129 53.5
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 6.0e-24 114.4 131 61.8
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 6.0e-24 114.4 118 61.9
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.0e-23 113.6 124 63.7
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 1.0e-23 113.6 120 65.8
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.0e-23 113.6 119 63.0
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.3e-23 113.2 128 57.8
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.7e-23 112.8 126 61.1
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.7e-23 112.8 122 58.2
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.7e-23 112.8 122 58.2
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.3e-23 112.5 133 58.6
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 2.3e-23 112.5 126 64.3
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 3.0e-23 112.1 119 63.9
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.0e-23 112.1 133 57.9
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.0e-23 112.1 122 56.6
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.9e-23 111.7 125 56.0
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 3.9e-23 111.7 127 56.7
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 5.1e-23 111.3 118 53.4
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 6.6e-23 110.9 131 58.8
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.1e-22 110.2 124 58.9
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.1e-22 110.2 119 63.9
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.5e-22 109.8 130 62.3
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.9e-22 109.4 121 57.0
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 1.9e-22 109.4 127 63.0
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 1.9e-22 109.4 130 61.5
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 2.5e-22 109.0 126 59.5
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.5e-22 109.0 120 55.0
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.5e-22 109.0 120 55.0
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 2.5e-22 109.0 135 51.1
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 3.3e-22 108.6 121 59.5
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 3.3e-22 108.6 121 59.5
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 3.3e-22 108.6 129 57.4
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 3.3e-22 108.6 120 54.2
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 4.3e-22 108.2 127 60.6
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 4.3e-22 108.2 124 50.8
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 5.6e-22 107.8 121 67.8
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 5.6e-22 107.8 118 60.2
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 5.6e-22 107.8 120 61.7
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 9.6e-22 107.1 119 64.7
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 9.6e-22 107.1 126 62.7
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 1.6e-21 106.3 127 55.1
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 2.1e-21 105.9 123 54.5
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.8e-21 105.5 126 60.3
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 8.1e-21 104.0 128 61.7
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 8.1e-21 104.0 121 56.2
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.4e-20 103.2 126 59.5
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.1e-20 102.1 133 53.4
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 9.9e-19 97.1 122 61.5
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.8e-18 95.1 120 53.3
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 8.4e-18 94.0 120 52.5
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 1.4e-17 93.2 125 45.6
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 9.3e-17 90.5 109 56.9
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.3e-15 86.7 102 53.9
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 5.1e-15 84.7 51 80.4
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 4.3e-14 81.6 42 90.5
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.8e-12 76.3 119 50.4
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 6.9e-12 74.3 57 70.2
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 6.9e-12 74.3 118 39.8
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 6.4e-10 67.8 62 58.1
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.1e-09 67.0 50 64.0
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 4.2e-09 65.1 133 35.3
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 7.1e-09 64.3 48 64.6
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 2.5e-06 55.8 121 42.1


User provided reference genes

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