Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 1.2e-233 812.8 391 100.0
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 2.8e-187 658.7 388 82.0
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 3.6e-166 588.6 384 73.4
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 4.9e-155 551.6 398 68.8
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 2.0e-153 546.2 386 69.4
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 1.7e-152 543.1 390 69.2
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 9.8e-148 527.3 385 68.8
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 2.2e-147 526.2 378 69.6
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 6.6e-144 514.6 381 67.7
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 1.6e-142 510.0 379 67.8
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 4.9e-139 498.4 375 66.4
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 1.4e-138 496.9 387 64.6
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 5.4e-138 495.0 388 64.2
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 4.6e-137 491.9 381 66.4
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 6.0e-137 491.5 393 64.9
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 1.0e-136 490.7 388 64.2
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 1.1e-135 487.3 388 64.4
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.9e-135 486.5 383 64.0
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 9.6e-135 484.2 388 62.1
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 3.1e-133 479.2 392 63.0
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 8.9e-133 477.6 391 63.7
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 8.9e-133 477.6 383 63.7
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 2.6e-132 476.1 389 63.2
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 7.6e-132 474.6 389 62.0
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 9.9e-132 474.2 395 61.3
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 1.7e-131 473.4 393 64.1
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 2.9e-131 472.6 385 63.1
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 4.9e-131 471.9 394 61.4
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 8.4e-131 471.1 380 62.4
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 9.3e-130 467.6 386 64.0
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 1.6e-129 466.8 394 58.4
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 2.7e-129 466.1 391 58.8
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 2.7e-129 466.1 410 58.8
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 6.0e-129 464.9 388 60.8
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 7.8e-129 464.5 393 61.3
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.3e-128 463.8 401 60.3
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 5.1e-128 461.8 386 59.1
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 6.6e-128 461.5 407 60.2
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 1.9e-127 459.9 385 59.5
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 1.9e-127 459.9 385 59.5
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 5.6e-127 458.4 389 60.2
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 7.3e-127 458.0 391 62.1
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 9.6e-127 457.6 399 61.9
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 9.6e-127 457.6 399 61.9
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 9.6e-127 457.6 385 59.2
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 2.1e-126 456.4 389 60.4
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 6.2e-126 454.9 386 61.4
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 6.2e-126 454.9 385 60.0
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 1.1e-125 454.1 392 59.9
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 1.1e-125 454.1 416 58.2
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 1.4e-125 453.8 386 60.9
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.8e-125 453.4 400 58.5
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 3.1e-125 452.6 386 60.6
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 3.1e-125 452.6 389 58.1
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 4.0e-125 452.2 395 60.8
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 5.3e-125 451.8 386 60.6
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 5.3e-125 451.8 386 60.6
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 9.0e-125 451.1 397 59.9
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 9.0e-125 451.1 397 57.7
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 2.0e-124 449.9 387 60.2
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 2.6e-124 449.5 380 58.4
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 3.4e-124 449.1 397 58.9
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 3.4e-124 449.1 395 59.5
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 1.3e-123 447.2 396 60.4
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 1.7e-123 446.8 386 60.1
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 2.2e-123 446.4 390 59.2
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 8.4e-123 444.5 388 61.3
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 1.1e-122 444.1 390 58.7
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 1.1e-122 444.1 383 60.1
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 2.4e-122 443.0 390 59.0
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 3.2e-122 442.6 399 57.6
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 4.2e-122 442.2 397 58.7
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.2e-121 440.7 397 58.9
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 1.2e-121 440.7 397 58.9
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 2.1e-121 439.9 397 58.7
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 6.0e-121 438.3 371 60.6
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 2.5e-119 433.0 396 56.8
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 4.3e-119 432.2 379 58.8
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 2.1e-118 429.9 401 56.6
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 4.0e-117 425.6 389 55.3
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 1.5e-116 423.7 315 67.6
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 6.4e-115 418.3 383 53.3
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 6.0e-113 411.8 377 54.6
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 6.7e-112 408.3 384 52.9
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 4.3e-111 405.6 303 67.0
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 1.3e-110 404.1 384 53.9
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 1.1e-109 401.0 358 58.7
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 2.2e-107 393.3 383 50.9
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 3.8e-107 392.5 380 55.0
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 5.3e-101 372.1 287 61.7
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 5.3e-101 372.1 218 83.0
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 5.7e-95 352.1 400 49.8
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 1.6e-94 350.5 317 58.7
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 2.8e-94 349.7 257 65.8
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 1.4e-90 337.4 400 46.2
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 1.0e-88 331.3 295 56.9
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 1.5e-84 317.4 397 45.3
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 2.0e-84 317.0 162 90.7
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.3e-78 297.7 389 42.2
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 6.3e-78 295.4 205 70.2
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.8e-77 293.9 200 69.0
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 2.4e-77 293.5 323 49.5
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 2.6e-76 290.0 379 45.1
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 3.8e-59 233.0 383 37.9
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 7.5e-55 218.8 252 45.2
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 8.6e-51 205.3 143 66.4
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 2.5e-50 203.8 387 34.6
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 5.4e-45 186.0 183 50.8
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 2.0e-36 157.5 110 63.6
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 5.0e-35 152.9 209 42.6
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 6.6e-35 152.5 215 43.3
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 5.6e-34 149.4 205 43.9
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 5.2e-32 142.9 144 55.6
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 5.1e-27 126.3 147 43.5
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 8.1e-25 119.0 95 60.0
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 1.2e-23 115.2 115 57.4
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 3.4e-23 113.6 90 60.0
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 1.6e-20 104.8 92 54.3
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 9.6e-18 95.5 68 60.3
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 2.1e-17 94.4 83 55.4
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 8.1e-17 92.4 95 46.3
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 2.4e-16 90.9 104 47.1
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 3.8e-14 83.6 103 41.7
Pp3c24_8170 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.4e-13 81.6 391 24.3
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 9.3e-13 79.0 58 62.1
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 9.3e-13 79.0 402 25.6
Cc07_g04590 Coffea canephora HOM05D004302 ORTHO05D004939 3.5e-12 77.0 368 25.3
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 6.0e-12 76.3 378 25.1
MELO3C022055.2 Cucumis melo HOM05D004302 ORTHO05D004939 1.0e-11 75.5 366 24.3
CsaV3_5G038750 Cucumis sativus L. HOM05D004302 ORTHO05D004939 1.3e-11 75.1 366 24.3
DCAR_025461 Daucus carota HOM05D004302 ORTHO05D004939 1.3e-11 75.1 362 24.3
SEGI_36099 Sequoiadendron giganteum HOM05D003005 ORTHO05D030467 3.0e-11 73.9 397 24.4
ClCG11G005010 Citrullus lanatus HOM05D004302 ORTHO05D004939 3.9e-11 73.6 366 24.3
SMO351G0091 Selaginella moellendorffii HOM05D005977 ORTHO05D007546 3.9e-11 73.6 397 24.4
ATR0691G100 Amborella trichopoda HOM05D004302 ORTHO05D004939 1.1e-10 72.0 359 27.0
Ca_06955_v3 Cicer arietinum L. HOM05D004302 ORTHO05D004939 1.9e-10 71.2 366 26.2
Sabra02G0093200 Salix brachista HOM05D007423 ORTHO05D009091 5.6e-10 69.7 369 24.4
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 7.3e-10 69.3 74 52.7
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 7.3e-10 69.3 157 35.7
Sp2g08010 Schrenkiella parvula HOM05D007423 ORTHO05D009091 1.1e-08 65.5 377 24.9
Potri.014G016200 Populus trichocarpa HOM05D007423 ORTHO05D009091 1.4e-08 65.1 369 23.3
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 1.4e-08 65.1 403 22.6
A09p20200 Brassica napus HOM05D007423 ORTHO05D009091 1.8e-08 64.7 372 25.0
C09p25610 Brassica napus HOM05D007423 ORTHO05D009091 1.8e-08 64.7 372 24.7
Aa31LG9G13280 Aethionema arabicum HOM05D007423 ORTHO05D009091 2.4e-08 64.3 367 25.6
Hma1.2p1_0819F.1_g223720 Hydrangea macrophylla HOM05D007423 ORTHO05D009091 2.4e-08 64.3 285 24.9
QL12p038053 Quercus lobata HOM05D007423 ORTHO05D009091 2.4e-08 64.3 380 23.9
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 3.1e-08 63.9 375 22.9
Duzib116G0599 Durio zibethinus HOM05D007423 ORTHO05D009091 6.9e-08 62.8 379 23.0
Ah.04g164550 Amaranthus hybridus HOM05D005977 ORTHO05D007546 9.0e-08 62.4 405 24.0
BraA09t37631Z Brassica rapa HOM05D007423 ORTHO05D009091 9.0e-08 62.4 372 24.7
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 9.0e-08 62.4 157 29.9
THA.LOC104814189 Tarenaya hassleriana HOM05D007423 ORTHO05D009091 9.0e-08 62.4 321 28.0
BcaC04g21943 Brassica carinata HOM05D007423 ORTHO05D009091 1.2e-07 62.0 378 25.1
BolC9t55461H Brassica oleracea HOM05D007423 ORTHO05D009091 1.2e-07 62.0 378 25.1
Cc10_g05770 Coffea canephora HOM05D007423 ORTHO05D009091 1.2e-07 62.0 331 26.3
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 2.0e-07 61.2 369 22.5
AT5G43190 Arabidopsis thaliana HOM05D007423 ORTHO05D009091 3.4e-07 60.5 368 24.7
Aqoxy5G02276 Aquilegia oxysepala HOM05D002809 ORTHO05D004939 4.5e-07 60.1 391 21.2
TAR636G3621 Trochodendron aralioides HOM05D003005 ORTHO05D004170 7.6e-07 59.3 402 22.4
Carub.0008s0548 Capsella rubella HOM05D007423 ORTHO05D009091 1.3e-06 58.5 375 25.1
SGA_v2.0_scaffold175G39328 Striga asiatica HOM05D005977 ORTHO05D007546 1.7e-06 58.2 408 24.0
FAN15G1020 Fragaria x ananassa HOM05D007423 ORTHO05D009091 3.8e-06 57.0 372 23.9
MBI16_g07988_MAGBIO Magnolia biondii HOM05D007423 ORTHO05D009091 4.9e-06 56.6 376 23.1
FvH4_6g34680 Fragaria vesca HOM05D006114 ORTHO05D007609 6.4e-06 56.2 56 57.1
FAN24G2841 Fragaria x ananassa HOM05D007423 ORTHO05D009091 6.4e-06 56.2 380 23.7


User provided reference genes

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