Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g034915 Medicago truncatula HOM05D000147 ORTHO05D004093 9.4e-98 360.1 177 100.0
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-26 123.6 119 50.4
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 2.1e-25 119.8 179 39.7
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-24 116.3 120 50.0
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 4.5e-23 112.1 111 50.5
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 8.4e-22 107.8 182 35.2
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-21 106.7 120 47.5
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-21 106.7 120 47.5
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-21 105.5 120 47.5
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-21 105.5 120 42.5
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 7.1e-21 104.8 120 46.7
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 7.1e-21 104.8 120 46.7
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-18 96.7 169 38.5
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-18 96.7 176 36.4
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-18 95.9 119 40.3
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 7.4e-18 94.7 124 41.9
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 2.1e-17 93.2 160 37.5
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 8.2e-17 91.3 129 39.5
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-16 90.9 172 33.1
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-16 90.5 120 42.5
Medtr2g055490 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-15 85.9 118 43.2
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-15 85.9 110 40.0
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 4.5e-15 85.5 184 34.2
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 5.8e-15 85.1 72 47.2
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-14 84.3 114 40.4
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-14 83.2 85 44.7
Medtr6g016355 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-13 80.9 105 39.0
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-13 80.1 95 44.2
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 3.2e-13 79.3 121 38.8
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 5.5e-13 78.6 120 35.8
Medtr1g045560 Medicago truncatula HOM05D000147 ORTHO05D004093 9.3e-13 77.8 89 46.1
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 1.6e-12 77.0 187 30.5
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-12 76.3 111 36.0
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-12 76.3 112 37.5
Medtr5g037920 Medicago truncatula HOM05D000147 ORTHO05D004093 7.9e-12 74.7 172 28.5
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-11 73.9 153 32.7
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-11 73.2 101 41.6
Medtr1g079820 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-11 72.8 75 45.3
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-11 72.4 71 40.8
TPR.G5236 Trifolium pratense HOM05D000003 ORTHO05D004093 3.9e-11 72.4 186 30.1
Medtr3g010950 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-11 71.6 185 30.8
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-11 71.6 122 34.4
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 8.7e-11 71.2 118 33.9
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-10 70.9 125 31.2
Medtr1g062840 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-10 69.7 54 55.6
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 5.7e-10 68.6 113 31.9
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 9.7e-10 67.8 71 42.3
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 9.7e-10 67.8 71 39.4
Medtr8g079540 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-09 67.4 106 34.9
Medtr1g017820 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-09 67.0 63 52.4
Medtr7g006470 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-09 67.0 80 41.2
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-09 66.6 95 37.9
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-09 65.9 76 38.2
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 3.7e-09 65.9 119 34.5
Medtr3g026270 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-09 65.1 52 51.9
PSO591G0286 Papaver somniferum HOM05D000003 ORTHO05D000004 8.2e-09 64.7 142 33.8
Medtr5g091440 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-08 64.3 112 35.7
Medtr7g072030 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-08 63.5 52 48.1
PSO782G2048 Papaver somniferum HOM05D000003 ORTHO05D001026 1.8e-08 63.5 133 31.6
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-08 63.2 113 32.7
Medtr2g438450 Medicago truncatula HOM05D000147 ORTHO05D004093 4.1e-08 62.4 67 43.3
Medtr5g047250 Medicago truncatula HOM05D030711 ORTHO05D046697 4.1e-08 62.4 113 34.5
Medtr4g036855 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-08 62.0 78 46.2
Glyma.17G217900 Glycine max HOM05D030711 ORTHO05D046697 6.9e-08 61.6 118 34.7
Medtr7g006380 Medicago truncatula HOM05D000147 ORTHO05D004093 9.0e-08 61.2 158 28.5
Medtr5g069700 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-07 60.5 66 42.4
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-07 60.5 99 38.4
PSO675G1718 Papaver somniferum HOM05D000435 ORTHO05D000430 2.0e-07 60.1 135 32.6
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-07 59.3 64 42.2
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 3.4e-07 59.3 141 29.8
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-07 58.5 102 31.4
PSO339G4589 Papaver somniferum HOM05D000003 ORTHO05D001026 5.9e-07 58.5 72 37.5
Medtr1g099430 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-07 58.2 106 30.2
Medtr1g109000 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-07 58.2 104 32.7
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-07 58.2 129 27.1
PSO675G6735 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-06 57.8 91 38.5
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 57.4 169 26.0
Medtr3g090920 Medicago truncatula HOM05D052847 ORTHO05D004093 1.3e-06 57.4 107 32.7
Medtr8g074230 Medicago truncatula HOM05D013398 ORTHO05D012877 1.3e-06 57.4 118 29.7
PSO541G0547 Papaver somniferum HOM05D000003 ORTHO05D001026 1.7e-06 57.0 101 31.7
PSO675G1801 Papaver somniferum HOM05D000003 ORTHO05D001026 1.7e-06 57.0 124 30.6
Medtr1g022215 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-06 56.6 112 29.5
PSO017G6728 Papaver somniferum HOM05D000040 ORTHO05D001026 2.2e-06 56.6 69 40.6
PSO063G0100 Papaver somniferum HOM05D000003 ORTHO05D001026 2.2e-06 56.6 85 38.8
PSO566G0070 Papaver somniferum HOM05D000003 ORTHO05D001026 2.2e-06 56.6 155 28.4
PSO384G2894 Papaver somniferum HOM05D000003 ORTHO05D001026 3.8e-06 55.8 67 37.3
Psat1g044840 Pisum sativum HOM05D000003 ORTHO05D000004 3.8e-06 55.8 106 34.0
PSO063G1913 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-06 55.5 165 26.7
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 8.5e-06 54.7 165 26.7
Medtr4g073820 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-06 54.7 55 47.3
Nn1g08273 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.5e-06 54.7 178 28.7
PSO063G5501 Papaver somniferum HOM05D000003 ORTHO05D001026 8.5e-06 54.7 68 39.7


User provided reference genes

Program Settings