Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g033875 Medicago truncatula HOM05D008054 ORTHO05D010196 4.5e-178 627.9 328 100.0
Medtr8g463500 Medicago truncatula HOM05D008054 ORTHO05D010196 4.9e-108 395.2 279 76.7
Medtr0042s0120 Medicago truncatula HOM05D008054 ORTHO05D010196 9.9e-101 370.9 272 74.6
Medtr7g035225 Medicago truncatula HOM05D008054 ORTHO05D010196 6.2e-95 351.7 272 73.5
Medtr0075s0050 Medicago truncatula HOM05D008054 ORTHO05D010196 9.6e-80 301.2 231 71.9
Medtr6g471720 Medicago truncatula HOM05D008054 ORTHO05D010196 3.7e-79 299.3 248 67.3
Medtr1g117040 Medicago truncatula HOM05D008054 ORTHO05D010196 5.8e-77 292.0 209 76.1
Medtr6g464680 Medicago truncatula HOM05D008054 ORTHO05D010196 3.4e-69 266.2 252 60.3
Medtr3g040140 Medicago truncatula HOM05D008054 ORTHO05D010196 7.9e-66 255.0 237 62.0
Medtr3g435910 Medicago truncatula HOM05D008054 ORTHO05D010196 1.6e-63 247.3 209 68.4
Medtr2g043690 Medicago truncatula HOM05D008054 ORTHO05D010196 8.2e-63 245.0 231 63.2
Medtr3g438210 Medicago truncatula HOM05D000014 ORTHO05D010196 5.5e-59 232.3 199 68.8
Medtr1058s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 3.7e-55 219.5 253 52.2
Medtr0467s0020 Medicago truncatula HOM05D008054 ORTHO05D000016 2.7e-50 203.4 133 85.7
Medtr0750s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 4.4e-48 196.1 99 93.9
Medtr7g014910 Medicago truncatula HOM05D008054 ORTHO05D010196 3.5e-45 186.4 169 60.4
Medtr1g053420 Medicago truncatula HOM05D000014 ORTHO05D000016 1.1e-43 181.4 133 78.2
Medtr6g052950 Medicago truncatula HOM05D008054 ORTHO05D010196 1.1e-43 181.4 230 50.0
Medtr0117s0100 Medicago truncatula HOM05D000014 ORTHO05D010196 5.5e-43 179.1 142 73.2
Medtr8g464520 Medicago truncatula HOM05D008054 ORTHO05D010196 1.6e-42 177.6 97 84.5
Medtr2g054450 Medicago truncatula HOM05D008054 ORTHO05D010196 1.0e-41 174.9 206 51.9
Medtr4g045590 Medicago truncatula HOM05D008054 ORTHO05D010196 1.4e-38 164.5 224 48.2
Medtr2g449670 Medicago truncatula HOM05D008054 ORTHO05D010196 5.9e-37 159.1 117 77.8
Medtr1g050915 Medicago truncatula HOM05D008054 ORTHO05D010196 5.5e-35 152.5 106 71.7
Medtr2g055140 Medicago truncatula HOM05D008054 ORTHO05D010196 3.6e-34 149.8 273 37.0
Medtr4g045643 Medicago truncatula HOM05D008054 ORTHO05D010196 4.1e-30 136.3 179 48.0
Medtr4g057550 Medicago truncatula HOM05D008054 ORTHO05D010196 6.1e-26 122.5 180 46.7
Medtr8g465210 Medicago truncatula HOM05D008054 ORTHO05D010196 8.0e-26 122.1 97 60.8
Medtr4g012680 Medicago truncatula HOM05D008054 ORTHO05D010196 1.2e-24 118.2 233 39.5
Medtr6g065930 Medicago truncatula HOM05D008054 ORTHO05D010196 1.2e-24 118.2 148 50.0
Medtr5g048600 Medicago truncatula HOM05D008054 ORTHO05D010196 2.0e-24 117.5 82 80.5
Medtr6g049110 Medicago truncatula HOM05D008054 ORTHO05D010196 5.7e-24 115.9 77 64.9
Medtr1g015673 Medicago truncatula HOM05D008054 ORTHO05D010196 4.9e-23 112.8 229 37.6
Medtr6g465620 Medicago truncatula HOM05D008054 ORTHO05D010196 2.4e-22 110.5 124 50.8
Medtr7g045307 Medicago truncatula HOM05D008054 ORTHO05D010196 5.9e-21 105.9 228 38.6
Medtr5g464630 Medicago truncatula HOM05D008054 ORTHO05D010196 1.3e-20 104.8 229 36.2
Medtr0031s0030 Medicago truncatula HOM05D008054 ORTHO05D010196 2.3e-20 104.0 157 43.3
Medtr6g006255 Medicago truncatula HOM05D008054 ORTHO05D010196 3.8e-20 103.2 118 50.0
Medtr0860s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 8.9e-17 92.0 120 51.7
Medtr4g026730 Medicago truncatula HOM05D008054 ORTHO05D010196 1.7e-15 87.8 81 53.1
Medtr6g471360 Medicago truncatula HOM05D000014 ORTHO05D000016 1.8e-14 84.3 250 31.2
Medtr0014s0350 Medicago truncatula HOM05D008054 ORTHO05D010196 2.4e-14 84.0 51 68.6
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 9.2e-14 82.0 55 74.5
Medtr7g029380 Medicago truncatula HOM05D008054 ORTHO05D010196 2.3e-12 77.4 68 64.7
Oeu016549.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-12 77.4 301 27.6
Medtr7g445300 Medicago truncatula HOM05D008054 ORTHO05D010196 3.0e-12 77.0 87 58.6
Medtr2g071670 Medicago truncatula HOM05D008054 ORTHO05D010196 3.9e-12 76.6 68 60.3
Oeu018682.1 Olea europaea HOM05D000014 ORTHO05D000016 3.9e-12 76.6 301 27.2
Medtr6g465890 Medicago truncatula HOM05D008054 ORTHO05D010196 5.0e-12 76.3 50 82.0
Thecc.03G049100 Theobroma cacao HOM05D000014 ORTHO05D000016 8.6e-12 75.5 285 27.7
Medtr8g465200 Medicago truncatula HOM05D008054 ORTHO05D010196 2.8e-10 70.5 151 41.7
Ca_19558_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.6e-10 70.1 266 28.6
Oeu052650.1 Olea europaea HOM05D000014 ORTHO05D000016 3.6e-10 70.1 303 28.1
Oeu056047.1 Olea europaea HOM05D000014 ORTHO05D000016 3.6e-10 70.1 286 28.3
Oeu011764.2 Olea europaea HOM05D000014 ORTHO05D000016 4.7e-10 69.7 290 31.7
PGR142G4155 Punica granatum HOM05D000014 ORTHO05D000016 4.7e-10 69.7 258 31.0
Medtr5g036110 Medicago truncatula HOM05D009496 ORTHO05D000356 6.2e-10 69.3 47 78.7
Medtr5g447010 Medicago truncatula HOM05D009496 ORTHO05D012882 6.2e-10 69.3 47 78.7
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 6.2e-10 69.3 256 30.5
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 8.0e-10 68.9 256 30.5
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-10 68.9 256 30.1
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 1.0e-09 68.6 309 26.2
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-09 68.6 256 30.5
Medtr0414s0030 Medicago truncatula HOM05D008054 ORTHO05D010196 1.4e-09 68.2 118 43.2
Oeu023386.1 Olea europaea HOM05D000014 ORTHO05D000016 1.8e-09 67.8 301 24.9
Oeu062277.1 Olea europaea HOM05D000014 ORTHO05D000016 1.8e-09 67.8 277 30.0
THA.LOC104801904 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.8e-09 67.8 178 30.9
THA.LOC104801906 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.8e-09 67.8 178 30.9
THA.LOC104803157 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.8e-09 67.8 178 30.9
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.8e-09 67.8 178 30.9
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.8e-09 67.8 178 30.9
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-09 67.4 263 27.4
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 67.0 256 30.1
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 67.0 256 30.1
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 67.0 256 30.1
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 67.0 256 30.1
THA.LOC104808007 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.1e-09 67.0 193 33.7
Medtr2g461370 Medicago truncatula HOM05D009496 ORTHO05D012882 4.0e-09 66.6 47 76.6
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 4.0e-09 66.6 256 30.1
Oeu062184.1 Olea europaea HOM05D000014 ORTHO05D000016 5.2e-09 66.2 162 34.6
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 5.2e-09 66.2 240 30.0
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 5.2e-09 66.2 256 30.1
Ca_07044_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.8e-09 65.9 155 34.2
Medtr2g059010 Medicago truncatula HOM05D008054 ORTHO05D010196 6.8e-09 65.9 59 61.0
CANSAT64G2256 Cannabis sativa HOM05D000014 ORTHO05D000016 8.9e-09 65.5 265 26.8
Oeu031405.1 Olea europaea HOM05D000014 ORTHO05D000016 8.9e-09 65.5 296 31.1
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 8.9e-09 65.5 256 30.1
Ca_05270_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.2e-08 65.1 267 28.5
THA.LOC104803440 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.2e-08 65.1 147 34.0
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-08 64.7 235 27.7
THA.LOC104800022 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.5e-08 64.7 147 34.0
Manes.07G068316 Manihot esculenta HOM05D000014 ORTHO05D000016 2.0e-08 64.3 252 31.0
Oeu037401.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-08 64.3 288 30.6
Ca_07139_v3 Cicer arietinum L. HOM05D008054 ORTHO05D010196 2.6e-08 63.9 57 59.6
Medtr3g435880 Medicago truncatula HOM05D008054 ORTHO05D010196 2.6e-08 63.9 246 24.4
Oeu030093.1 Olea europaea HOM05D000014 ORTHO05D000016 2.6e-08 63.9 155 33.5
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 2.6e-08 63.9 256 29.7
Medtr0175s0020 Medicago truncatula HOM05D008054 ORTHO05D010196 3.4e-08 63.5 136 39.7
Oeu059375.1 Olea europaea HOM05D000014 ORTHO05D000016 3.4e-08 63.5 254 26.8
Medtr0560s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 4.4e-08 63.2 221 31.7
Oeu001982.1 Olea europaea HOM05D000014 ORTHO05D013897 5.8e-08 62.8 237 29.1
Oeu047562.1 Olea europaea HOM05D000014 ORTHO05D000016 5.8e-08 62.8 167 30.5
Oeu063639.1 Olea europaea HOM05D000014 ORTHO05D000016 5.8e-08 62.8 179 31.8
Medtr4g037555 Medicago truncatula HOM05D009496 ORTHO05D012882 7.5e-08 62.4 47 74.5
Oeu037099.1 Olea europaea HOM05D000014 ORTHO05D000016 7.5e-08 62.4 156 31.4
Medtr2g461870 Medicago truncatula HOM05D008054 ORTHO05D010196 9.8e-08 62.0 99 42.4
Oeu046742.1 Olea europaea HOM05D000014 ORTHO05D000016 9.8e-08 62.0 282 27.7
Oeu063720.1 Olea europaea HOM05D000014 ORTHO05D000016 9.8e-08 62.0 281 26.3
THA.LOC104806044 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 9.8e-08 62.0 187 31.6
Medtr2g059000 Medicago truncatula HOM05D008054 ORTHO05D010196 1.3e-07 61.6 59 57.6
Oeu012463.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-07 61.6 250 29.6
Oeu048405.1 Olea europaea HOM05D000014 ORTHO05D000016 1.7e-07 61.2 270 28.5
Oeu055876.1 Olea europaea HOM05D000014 ORTHO05D000016 1.7e-07 61.2 237 29.5
Oeu026686.1 Olea europaea HOM05D000014 ORTHO05D000016 2.2e-07 60.8 150 36.0
Medtr0485s0050 Medicago truncatula HOM05D008054 ORTHO05D010196 2.9e-07 60.5 118 39.8
THA.LOC104804963 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.9e-07 60.5 147 34.0
Oeu027999.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-07 60.1 137 32.8
Oeu046602.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-07 60.1 156 34.0
Oeu061498.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-07 60.1 149 34.2
Medtr6g016805 Medicago truncatula HOM05D009496 ORTHO05D012882 4.9e-07 59.7 47 72.3
Medtr7g052885 Medicago truncatula HOM05D009496 ORTHO05D012882 4.9e-07 59.7 47 72.3
Oeu012512.1 Olea europaea HOM05D000014 ORTHO05D000016 4.9e-07 59.7 282 27.0
Oeu061628.1 Olea europaea HOM05D000014 ORTHO05D000016 4.9e-07 59.7 151 33.1
THA.LOC104810206 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.9e-07 59.7 149 32.9
Oeu011245.1 Olea europaea HOM05D000014 ORTHO05D000016 6.4e-07 59.3 164 31.7
Oeu063865.1 Olea europaea HOM05D000014 ORTHO05D000016 6.4e-07 59.3 151 34.4
PGR031G1263 Punica granatum HOM05D000014 ORTHO05D000016 6.4e-07 59.3 142 34.5
THA.LOC104815198 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 6.4e-07 59.3 197 29.4
THA.LOC104825822 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 6.4e-07 59.3 187 28.9
Ca_03084_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.3e-07 58.9 199 29.6
Oeu006139.1 Olea europaea HOM05D000014 ORTHO05D000016 8.3e-07 58.9 156 30.1
Oeu018350.1 Olea europaea HOM05D000014 ORTHO05D000016 8.3e-07 58.9 150 32.7
Oeu049299.1 Olea europaea HOM05D000014 ORTHO05D000016 8.3e-07 58.9 151 30.5
THA.LOC104822860 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 8.3e-07 58.9 170 28.8
Oeu009238.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-06 58.5 156 30.1
Oeu016850.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-06 58.5 161 31.7
Oeu022855.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-06 58.5 272 27.2
THA.LOC104810565 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.1e-06 58.5 211 28.0
Oeu004048.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-06 58.2 151 33.8
Oeu030494.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-06 58.2 230 29.1
SHI49828 Sapria himalayana HOM05D000014 ORTHO05D000016 1.4e-06 58.2 254 26.4
THA.LOC104805026 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.4e-06 58.2 203 28.6
THA.LOC104809785 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.4e-06 58.2 187 29.9
THA.LOC104825823 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.4e-06 58.2 175 28.6
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.9e-06 57.8 189 28.0
Medtr7g034010 Medicago truncatula HOM05D008802 ORTHO05D010196 1.9e-06 57.8 73 50.7
ClCG06G009730 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.4e-06 57.4 202 28.2
Oeu002459.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-06 57.4 237 28.3
Oeu016474.1 Olea europaea HOM05D000014 ORTHO05D000093 2.4e-06 57.4 138 34.8
Phvul.008G165150 Phaseolus vulgaris HOM05D000014 ORTHO05D013897 2.4e-06 57.4 311 23.8
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 2.4e-06 57.4 221 27.6
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 2.4e-06 57.4 221 27.6
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 2.4e-06 57.4 221 27.6
THA.LOC104818147 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.4e-06 57.4 170 27.6
CANSAT25G3714 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-06 57.0 134 33.6
Oeu016725.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-06 57.0 160 30.6
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-06 57.0 221 27.6
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-06 57.0 221 27.6
Medtr5g049650 Medicago truncatula HOM05D009496 ORTHO05D012882 4.1e-06 56.6 36 83.3
Medtr7g028380 Medicago truncatula HOM05D009496 ORTHO05D012882 4.1e-06 56.6 47 70.2
Oeu000609.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-06 56.6 151 33.8
Oeu047037.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-06 56.6 150 34.0
Oeu051730.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-06 56.6 153 34.0
Oeu055398.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-06 56.6 132 35.6
Lj2g0009123 Lotus japonicus HOM05D000014 ORTHO05D000016 5.4e-06 56.2 293 27.3
Medtr8g446060 Medicago truncatula HOM05D009496 ORTHO05D010019 5.4e-06 56.2 30 93.3
Oeu039249.1 Olea europaea HOM05D000014 ORTHO05D000016 5.4e-06 56.2 237 28.3
Oeu059496.1 Olea europaea HOM05D000014 ORTHO05D000016 7.0e-06 55.8 206 31.6
CANSAT01G2028 Cannabis sativa HOM05D000014 ORTHO05D000016 9.2e-06 55.5 151 29.8
Oeu007306.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-06 55.5 154 31.2
Oeu021371.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-06 55.5 153 34.0
Oeu026416.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-06 55.5 229 30.1
Oeu051081.1 Olea europaea HOM05D000014 ORTHO05D000016 9.2e-06 55.5 154 31.2
Hund19517 Selenicereus undatus HOM05D007290 ORTHO05D016386 9.2e-06 55.5 82 39.0


User provided reference genes

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