Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 1.7e-199 699.1 342 100.0
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 1.3e-164 583.2 339 84.1
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 5.6e-155 551.2 343 78.4
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 8.6e-148 527.3 340 76.2
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.9e-147 526.2 339 74.0
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 2.1e-146 522.7 338 75.4
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.8e-144 514.6 337 73.3
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 7.1e-142 507.7 343 71.7
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 3.3e-139 498.8 343 71.1
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 1.8e-137 493.0 329 73.6
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 6.4e-135 484.6 344 68.0
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.2e-133 480.3 344 66.3
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.2e-133 480.3 342 67.3
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 1.6e-133 479.9 336 68.2
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 4.6e-133 478.4 337 68.5
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 6.0e-133 478.0 341 66.3
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 7.8e-133 477.6 339 67.6
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.0e-132 477.2 344 66.0
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.3e-132 476.1 344 66.0
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 5.1e-132 474.9 336 67.3
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 6.6e-132 474.6 343 67.1
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.1e-131 473.8 336 69.0
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.1e-131 473.8 342 66.7
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 2.5e-131 472.6 337 67.4
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 9.6e-131 470.7 340 65.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.2e-130 470.3 341 66.3
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 4.7e-130 468.4 349 64.5
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 4.7e-130 468.4 343 67.6
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 6.2e-130 468.0 347 64.8
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 8.1e-130 467.6 342 65.2
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.4e-129 466.8 345 65.2
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.8e-129 466.5 347 65.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 3.1e-129 465.7 342 64.9
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 4.0e-129 465.3 336 64.3
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 4.0e-129 465.3 344 65.1
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 5.2e-129 464.9 342 64.9
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 9.0e-129 464.2 331 64.4
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 1.5e-128 463.4 338 65.4
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.5e-128 463.4 342 64.9
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 2.6e-128 462.6 336 64.0
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 2.6e-128 462.6 342 65.2
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 4.4e-128 461.8 331 68.6
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.4e-128 461.8 343 64.1
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 9.9e-128 460.7 350 64.0
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 2.9e-127 459.1 331 67.4
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 6.4e-127 458.0 339 65.5
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 8.4e-127 457.6 337 62.0
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 8.4e-127 457.6 336 63.7
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 1.9e-126 456.4 341 63.3
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 2.4e-126 456.1 341 62.2
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 2.4e-126 456.1 338 62.7
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 3.2e-126 455.7 344 63.7
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 9.3e-126 454.1 343 66.5
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 2.1e-125 453.0 334 64.4
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 2.7e-125 452.6 338 62.4
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 2.7e-125 452.6 335 65.7
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.7e-125 452.6 343 66.2
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 2.7e-125 452.6 335 63.3
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 3.5e-125 452.2 337 63.5
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 4.6e-125 451.8 339 62.5
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.0e-124 450.7 333 64.0
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.0e-124 450.7 337 63.2
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 2.3e-124 449.5 333 66.1
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.0e-124 449.1 333 64.9
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 3.9e-124 448.7 335 65.4
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 3.9e-124 448.7 337 61.7
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 3.9e-124 448.7 333 65.5
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.9e-123 446.4 343 63.8
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 1.9e-123 446.4 337 64.7
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 2.5e-123 446.0 333 65.2
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.3e-123 445.7 331 63.7
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 4.3e-123 445.3 388 57.5
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 5.6e-123 444.9 342 63.7
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 5.6e-123 444.9 345 63.2
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 1.6e-122 443.4 337 60.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 2.1e-122 443.0 330 62.7
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 2.1e-122 443.0 331 64.4
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.1e-122 443.0 331 64.7
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.8e-122 442.6 337 61.1
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.8e-122 442.6 331 64.4
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 6.2e-122 441.4 338 63.0
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-121 439.9 330 63.6
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 4.0e-121 438.7 343 63.6
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 5.3e-121 438.3 343 63.6
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 6.9e-121 438.0 333 60.4
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.2e-120 437.2 348 60.3
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 2.6e-120 436.0 329 62.6
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 2.6e-120 436.0 334 60.8
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 4.5e-120 435.3 346 62.1
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.8e-120 434.9 331 63.7
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.2e-118 428.7 331 62.2
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 3.5e-117 425.6 364 56.6
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 3.0e-116 422.5 372 57.5
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.5e-115 420.2 338 62.4
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.3e-114 417.2 347 60.8
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.3e-114 417.2 333 62.2
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 3.7e-114 415.6 350 56.0
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 4.2e-110 402.1 346 59.2
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 6.0e-109 398.3 439 49.4
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 1.3e-108 397.1 331 57.4
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 9.6e-107 391.0 338 57.4
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 1.6e-106 390.2 339 59.9
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 1.7e-103 380.2 358 54.7
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 4.9e-103 378.6 285 64.9
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 5.7e-99 365.2 347 51.6
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 4.1e-97 359.0 262 64.5
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.3e-90 337.4 252 64.3
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.8e-90 335.5 294 61.6
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.8e-89 333.6 262 62.6
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 2.3e-84 316.6 230 62.2
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 9.4e-78 294.7 344 44.2
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.7e-77 292.4 183 72.7
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.7e-77 292.4 183 72.7
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.4e-68 264.2 341 39.6
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 2.9e-63 246.5 329 40.1
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.2e-62 243.0 200 61.5
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.7e-48 196.8 179 57.0
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 5.9e-48 195.7 194 53.1
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 8.6e-47 191.8 258 39.1
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.0e-44 184.9 184 52.7
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.0e-39 168.3 174 52.3
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-39 167.9 200 46.0
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 6.6e-39 165.6 166 51.8
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.3e-34 151.4 81 90.1
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 2.0e-19 100.9 129 40.3
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.4e-19 99.8 160 38.1
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.4e-19 99.8 160 38.1
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.4e-19 99.8 160 38.1
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 2.9e-18 97.1 160 37.5
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 5.1e-15 86.3 126 36.5
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.6e-13 81.3 61 62.3
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 2.8e-13 80.5 75 53.3
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 2.8e-13 80.5 75 53.3
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-12 78.6 103 45.6
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.0e-12 76.6 87 51.7
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 4.0e-12 76.6 87 51.7
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.5e-11 74.7 87 50.6
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 6.4e-10 69.3 54 57.4
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.2e-08 65.1 67 46.3


User provided reference genes

Program Settings