Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g023955 Medicago truncatula HOM05D000151 ORTHO05D000074 1.6e-128 462.6 211 100.0
TPR.G32987 Trifolium pratense HOM05D000151 ORTHO05D000074 2.1e-51 206.5 285 40.7
TPR.G21838 Trifolium pratense HOM05D000151 ORTHO05D000074 3.0e-50 202.6 284 40.5
TPR.G12009 Trifolium pratense HOM05D000151 ORTHO05D000074 3.3e-49 199.1 288 40.3
Psat5g179080 Pisum sativum HOM05D000151 ORTHO05D000074 4.1e-47 192.2 246 39.8
TPR.G18206 Trifolium pratense HOM05D000151 ORTHO05D000074 5.8e-46 188.3 256 40.2
Psat5g177000 Pisum sativum HOM05D000151 ORTHO05D000074 4.2e-44 182.2 251 38.2
Medtr1g064570 Medicago truncatula HOM05D000151 ORTHO05D000074 1.9e-41 173.3 252 38.1
TPR.G33767 Trifolium pratense HOM05D000151 ORTHO05D000074 3.3e-41 172.6 312 36.2
Psat0s3333g0120 Pisum sativum HOM05D000151 ORTHO05D000074 2.6e-38 162.9 252 37.3
Psat0s3333g0040 Pisum sativum HOM05D000151 ORTHO05D000074 3.2e-36 156.0 252 35.7
Medtr5g038260 Medicago truncatula HOM05D000151 ORTHO05D000074 5.1e-34 148.7 277 33.2
Ca_04705_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 2.5e-33 146.4 190 41.6
Ca_04730_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 1.4e-31 140.6 241 34.4
TPR.G11302 Trifolium pratense HOM05D000151 ORTHO05D000074 2.4e-31 139.8 296 32.1
Medtr5g038230 Medicago truncatula HOM05D000151 ORTHO05D000074 6.5e-29 131.7 250 34.0
TPR.G29467 Trifolium pratense HOM05D000151 ORTHO05D000074 3.2e-28 129.4 256 33.2
TPR.G2565 Trifolium pratense HOM05D000151 ORTHO05D000074 2.6e-22 109.8 146 45.2
Psat0s3333g0080 Pisum sativum HOM05D000151 ORTHO05D000074 7.7e-22 108.2 88 59.1
Psat1g155320 Pisum sativum HOM05D000151 ORTHO05D000074 1.5e-20 104.0 270 27.8
Psat2g125280 Pisum sativum HOM05D000151 ORTHO05D000074 1.0e-18 97.8 90 53.3
Lj2g0004044 Lotus japonicus HOM05D000151 ORTHO05D000074 2.3e-18 96.7 242 31.0
Thecc.06G025900 Theobroma cacao HOM05D000151 ORTHO05D000074 1.8e-15 87.0 80 51.2
Thecc.03G245200 Theobroma cacao HOM05D000151 ORTHO05D000074 5.3e-15 85.5 92 52.2
Thecc.04G160800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.5e-14 82.8 84 48.8
Lj2g0017574 Lotus japonicus HOM05D000151 ORTHO05D000074 7.7e-14 81.6 231 27.3
QL01p024159 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-13 80.9 113 42.5
TPR.G34970 Trifolium pratense HOM05D000151 ORTHO05D000074 1.3e-13 80.9 62 51.6
Thecc.03G245300 Theobroma cacao HOM05D000151 ORTHO05D000074 3.8e-13 79.3 82 51.2
Thecc.05G050600 Theobroma cacao HOM05D000151 ORTHO05D000074 3.8e-13 79.3 77 48.1
Lj2g0002671 Lotus japonicus HOM05D000151 ORTHO05D000074 5.0e-13 79.0 238 26.1
FvH4_4g29690 Fragaria vesca HOM05D000151 ORTHO05D000074 1.1e-12 77.8 84 48.8
RcHm_v2.0_Chr2g0133991 Rosa chinensis HOM05D000151 ORTHO05D000074 1.5e-12 77.4 240 26.2
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 3.2e-12 76.3 87 49.4
Prupe.1G009400 Prunus persica HOM05D000151 ORTHO05D000074 7.2e-12 75.1 84 50.0
Gohir.A05G410900 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.4e-12 74.7 79 45.6
Gohir.A06G198050 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.4e-12 74.7 85 43.5
Gohir.A13G150700 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.4e-12 74.7 85 44.7
Gohir.A05G410400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.2e-11 74.3 79 45.6
FvH4_4g29670 Fragaria vesca HOM05D000151 ORTHO05D000074 1.6e-11 73.9 117 39.3
RcHm_v2.0_Chr2g0092531 Rosa chinensis HOM05D000151 ORTHO05D000074 2.1e-11 73.6 75 53.3
Gohir.A06G034400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.7e-11 73.2 85 42.4
Thecc.06G008300 Theobroma cacao HOM05D000151 ORTHO05D000074 2.7e-11 73.2 82 47.6
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 6.1e-11 72.0 78 52.6
Gohir.A06G034250 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.4e-10 70.9 87 43.7
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 1.8e-10 70.5 101 45.5
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 6.8e-10 68.6 81 50.6
FvH4_4g29110 Fragaria vesca HOM05D000151 ORTHO05D000074 8.8e-10 68.2 91 44.0
FAN12G3793 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.8e-10 68.2 91 44.0
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 2.0e-09 67.0 103 43.7
Dinv28402 Davidia involucrata HOM05D000151 ORTHO05D000074 2.0e-09 67.0 161 32.9
Medtr1g108740 Medicago truncatula HOM05D000151 ORTHO05D000074 2.0e-09 67.0 81 44.4
FAN17G0578 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-09 66.6 114 36.8
FAN22G1937 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-09 66.6 84 42.9
Medtr5g082770 Medicago truncatula HOM05D000151 ORTHO05D000074 2.6e-09 66.6 123 39.8
Dinv28403 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-09 64.7 106 38.7
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-08 64.3 89 37.1
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 1.7e-08 63.9 94 39.4
RcHm_v2.0_Chr2g0173801 Rosa chinensis HOM05D000151 ORTHO05D000074 1.7e-08 63.9 99 40.4
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.8e-08 63.2 108 34.3
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-08 63.2 106 37.7
FAN23G2573 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.8e-08 63.2 79 43.0
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 2.8e-08 63.2 79 43.0
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.8e-08 63.2 80 43.8
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 2.8e-08 63.2 80 47.5
Medtr7g077620 Medicago truncatula HOM05D000151 ORTHO05D000074 2.8e-08 63.2 113 39.8
Dinv15578 Davidia involucrata HOM05D000151 ORTHO05D000074 3.7e-08 62.8 129 29.5
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.3e-08 61.6 284 22.2
TPR.G4837 Trifolium pratense HOM05D000151 ORTHO05D000074 1.1e-07 61.2 75 48.0
Prupe.8G049800 Prunus persica HOM05D000151 ORTHO05D000074 1.8e-07 60.5 107 38.3
Lalb_Chr10g0091501 Lupinus albus HOM05D000151 ORTHO05D000074 2.4e-07 60.1 74 41.9
Medtr5g082780 Medicago truncatula HOM05D000151 ORTHO05D000074 2.4e-07 60.1 75 44.0
FAN07G2226 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-07 59.7 84 39.3
Prupe.1G208900 Prunus persica HOM05D000151 ORTHO05D000074 3.1e-07 59.7 66 50.0
Medtr7g076100 Medicago truncatula HOM05D000151 ORTHO05D000074 4.1e-07 59.3 117 39.3
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 5.4e-07 58.9 132 31.8
Prupe.1G158300 Prunus persica HOM05D000151 ORTHO05D000074 5.4e-07 58.9 90 38.9
MD13G1075200 Malus domestica HOM05D000151 ORTHO05D000074 9.1e-07 58.2 78 43.6
Duzib052G1217 Durio zibethinus HOM05D000151 ORTHO05D000074 1.2e-06 57.8 196 23.0
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.2e-06 57.8 112 34.8
Haze_03426 Corylus avellana HOM05D000151 ORTHO05D000074 1.6e-06 57.4 83 42.2
CAN.G311.85 Capsicum annuum HOM05D000151 ORTHO05D000074 2.0e-06 57.0 99 30.3
FvH4_6g52260 Fragaria vesca HOM05D000151 ORTHO05D000074 2.0e-06 57.0 79 43.0
FAN05G4245 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-06 57.0 79 43.0
FAN14G3774 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-06 57.0 79 43.0
RcHm_v2.0_Chr7g0224141 Rosa chinensis HOM05D000151 ORTHO05D000074 2.0e-06 57.0 83 39.8
Aqoxy6G01884 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-06 56.6 75 37.3
FvH4_1g07660 Fragaria vesca HOM05D000151 ORTHO05D000074 2.7e-06 56.6 93 35.5
Gohir.A11G013450 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.7e-06 56.6 85 34.1
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 2.7e-06 56.6 73 41.1
Haze_06927 Corylus avellana HOM05D000151 ORTHO05D000074 3.5e-06 56.2 117 32.5
Haze_06934 Corylus avellana HOM05D000151 ORTHO05D000074 3.5e-06 56.2 117 32.5
Rhsim12G0122800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.5e-06 56.2 66 47.0
Haze_17426 Corylus avellana HOM05D000566 ORTHO05D000686 4.5e-06 55.8 88 40.9
Haze_17429 Corylus avellana HOM05D000151 ORTHO05D000074 4.5e-06 55.8 88 40.9
Actinidia20872 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.9e-06 55.5 76 34.2
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.9e-06 55.5 74 40.5
Cc11_g10930 Coffea canephora HOM05D000151 ORTHO05D000074 5.9e-06 55.5 75 34.7
Lalb_Chr17g0336061 Lupinus albus HOM05D000151 ORTHO05D000074 5.9e-06 55.5 80 41.2
Cfa010489 Carpinus fangiana HOM05D000151 ORTHO05D000074 7.7e-06 55.1 77 39.0
Rhsim08G0250200 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.7e-06 55.1 130 32.3


User provided reference genes

Program Settings