Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g016945 Medicago truncatula HOM05D066090 ORTHO05D264393 5.4e-162 574.3 298 100.0
Medtr5g085310 Medicago truncatula HOM05D000912 ORTHO05D001232 7.0e-45 185.3 293 46.4
Medtr6g016940 Medicago truncatula HOM05D066090 ORTHO05D267126 2.0e-28 130.6 96 88.5
Medtr3g101100 Medicago truncatula HOM05D000912 ORTHO05D001232 3.9e-27 126.3 216 41.7
Psat0s4447g0040 Pisum sativum HOM05D000912 ORTHO05D001232 1.8e-24 117.5 199 41.2
Ca_26347_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 6.8e-24 115.5 258 39.5
Psat1g061920 Pisum sativum HOM05D000912 ORTHO05D001232 8.9e-24 115.2 210 40.5
TPR.G9664 Trifolium pratense HOM05D000912 ORTHO05D001232 1.2e-23 114.8 245 37.6
Medtr3g107960 Medicago truncatula HOM05D000912 ORTHO05D001232 1.3e-22 111.3 286 31.5
TPR.G19978 Trifolium pratense HOM05D000912 ORTHO05D001232 2.2e-22 110.5 219 37.0
Medtr6g017010 Medicago truncatula HOM05D000912 ORTHO05D001232 4.9e-22 109.4 133 45.1
Ca_26250_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 4.7e-17 92.8 239 33.9
Ca_14089_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 5.2e-16 89.4 252 32.5
Glyma.19G044000 Glycine max HOM05D000912 ORTHO05D001232 1.4e-13 81.3 159 36.5
arahy.Tifrunner.gnm1.ann1.9W5653 Arachis hypogaea HOM05D000912 ORTHO05D001232 6.0e-12 75.9 155 32.3
arahy.Tifrunner.gnm1.ann1.6WKR13 Arachis hypogaea HOM05D000912 ORTHO05D001232 1.3e-11 74.7 155 31.6
Medtr6g017000 Medicago truncatula HOM05D000912 ORTHO05D001232 1.7e-11 74.3 239 30.5
Phvul.003G032800 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 1.2e-09 68.2 188 27.1
Medtr1g047930 Medicago truncatula HOM05D000912 ORTHO05D001232 4.7e-09 66.2 109 39.4
Lj5g0012560 Lotus japonicus HOM05D000912 ORTHO05D001232 5.2e-08 62.8 156 28.8
Lj5g0024613 Lotus japonicus HOM05D000912 ORTHO05D001232 6.8e-08 62.4 209 26.3
Lj5g0024138 Lotus japonicus HOM05D000912 ORTHO05D001232 1.2e-07 61.6 156 27.6
Dinv33924 Davidia involucrata HOM05D000912 ORTHO05D001232 3.4e-07 60.1 215 28.4
RcHm_v2.0_Chr2g0163411 Rosa chinensis HOM05D000912 ORTHO05D001232 4.4e-07 59.7 132 32.6
FAN09G4355 Fragaria x ananassa HOM05D000912 ORTHO05D001232 5.8e-07 59.3 132 32.6
FvH4_6g45470 Fragaria vesca HOM05D000912 ORTHO05D001232 7.6e-07 58.9 132 32.6
FAN14G3458 Fragaria x ananassa HOM05D000912 ORTHO05D001232 7.6e-07 58.9 132 32.6
Cpa.g.sc179.37 Carica papaya HOM05D000912 ORTHO05D001232 9.9e-07 58.5 141 30.5
Thecc.04G140300 Theobroma cacao HOM05D000912 ORTHO05D001232 9.9e-07 58.5 141 29.8
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 2.2e-06 57.4 139 30.2
GSVIVG01031074001 Vitis vinifera HOM05D000912 ORTHO05D001232 2.9e-06 57.0 149 30.2
Manes.01G107500 Manihot esculenta HOM05D000912 ORTHO05D001232 6.4e-06 55.8 155 29.0
SHI05867 Sapria himalayana HOM05D000912 ORTHO05D001232 6.4e-06 55.8 139 29.5


User provided reference genes

Program Settings