Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.7e-121 438.0 234 100.0
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 4.1e-101 371.7 204 91.7
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 9.5e-98 360.5 193 90.7
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 4.2e-85 318.5 202 79.2
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 5.4e-85 318.2 202 78.7
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.6e-84 316.6 234 78.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 7.3e-82 307.8 187 80.7
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.6e-81 306.6 200 77.0
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 3.6e-81 305.4 199 75.9
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 2.2e-78 296.2 204 73.0
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.2e-76 290.4 160 88.8
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 1.1e-72 277.3 190 72.6
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.8e-72 276.6 183 77.0
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 6.9e-72 274.6 193 72.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 4.5e-71 271.9 174 78.7
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.4e-69 266.9 159 81.8
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.9e-69 266.5 194 69.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.2e-69 265.8 175 76.6
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 3.2e-69 265.8 197 68.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 4.2e-69 265.4 199 64.3
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 4.2e-69 265.4 194 71.1
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 7.1e-69 264.6 194 69.1
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 3.5e-68 262.3 170 75.9
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 4.6e-68 261.9 175 76.6
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 6.0e-68 261.5 173 76.9
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.9e-68 261.2 197 70.6
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 7.9e-68 261.2 170 77.6
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.0e-67 260.8 185 71.4
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.0e-67 260.8 198 70.2
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.3e-67 260.4 201 67.7
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 1.8e-67 260.0 175 74.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.0e-67 259.2 194 68.0
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 5.1e-67 258.5 185 70.8
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 5.1e-67 258.5 172 77.3
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 8.7e-67 257.7 175 69.1
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 8.7e-67 257.7 185 69.2
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 2.5e-66 256.1 195 66.2
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 2.5e-66 256.1 198 67.7
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 5.6e-66 255.0 196 65.3
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 7.4e-66 254.6 175 68.0
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 7.4e-66 254.6 203 61.1
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 1.3e-65 253.8 170 71.8
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 1.6e-65 253.4 206 62.6
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 2.1e-65 253.1 212 60.4
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 2.8e-65 252.7 191 66.5
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 3.7e-65 252.3 194 64.9
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 4.8e-65 251.9 173 72.8
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.4e-64 250.4 192 69.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 2.4e-64 249.6 176 68.8
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.4e-64 249.6 211 60.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 3.1e-64 249.2 175 68.6
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 3.1e-64 249.2 175 68.6
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 3.1e-64 249.2 175 68.6
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 3.1e-64 249.2 175 68.6
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 6.9e-64 248.1 172 72.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 9.0e-64 247.7 207 59.9
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.5e-63 246.9 175 70.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.7e-62 243.4 172 67.4
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 2.9e-62 242.7 169 70.4
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 3.8e-62 242.3 165 72.1
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 8.4e-62 241.1 155 75.5
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 1.4e-61 240.4 159 77.4
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.9e-61 240.0 138 81.9
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.9e-61 240.0 194 61.9
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.5e-61 239.6 182 67.0
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 3.2e-61 239.2 170 70.0
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.2e-60 237.3 137 82.5
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 2.7e-60 236.1 167 71.3
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 3.5e-60 235.7 190 62.6
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 4.6e-60 235.3 172 67.4
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.3e-59 233.8 149 75.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.8e-59 233.4 183 63.4
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 6.7e-59 231.5 201 61.2
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.1e-58 230.7 173 65.9
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.9e-58 229.9 141 75.9
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 5.7e-58 228.4 165 67.3
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 5.7e-58 228.4 172 69.2
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.6e-57 226.9 176 68.2
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.6e-57 226.9 167 66.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.6e-57 226.9 167 66.5
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 2.1e-57 226.5 176 65.9
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.8e-57 225.3 166 66.9
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.6e-55 219.5 216 55.1
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.0e-54 217.6 179 62.0
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.9e-53 213.4 195 62.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 4.2e-53 212.2 135 71.9
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.3e-51 207.2 174 62.6
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 2.5e-50 203.0 159 66.0
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 7.4e-50 201.4 177 60.5
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.7e-50 201.1 160 63.1
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.2e-49 199.9 113 78.8
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 6.9e-48 194.9 194 55.7
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.4e-43 180.6 167 57.5
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.0e-43 179.5 144 63.9
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.8e-41 172.2 204 52.9
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.2e-39 167.5 192 47.4
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 1.7e-38 163.7 169 50.9
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 5.2e-35 152.1 86 80.2
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.8e-33 146.4 199 45.7
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.2e-31 141.0 142 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 2.9e-30 136.3 149 47.7
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.0e-27 126.3 66 84.8
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.1e-24 117.9 81 66.7
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 8.8e-19 98.2 88 63.6
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 2.0e-18 97.1 171 39.8
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.7e-17 92.8 56 73.2
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 4.1e-16 89.4 62 66.1
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 5.4e-16 89.0 125 47.2
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.1e-12 77.0 74 60.8
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.1e-12 77.0 90 50.0
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.7e-09 67.4 39 69.2
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 2.9e-06 56.6 94 34.0


User provided reference genes

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