Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.0e-229 799.7 399 100.0
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 6.2e-190 667.5 406 83.3
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 1.2e-180 636.7 405 80.0
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 4.5e-180 634.8 404 80.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.7e-179 632.9 400 79.0
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 5.1e-176 621.3 400 79.5
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 8.7e-176 620.5 407 76.9
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.3e-175 618.6 403 77.7
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.6e-172 609.0 400 76.2
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.1e-170 603.6 400 75.5
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 8.5e-155 550.8 342 75.7
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.1e-153 546.2 375 72.3
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 2.3e-152 542.7 407 67.6
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 3.0e-152 542.3 349 73.9
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.1e-151 540.4 413 67.8
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 2.0e-151 539.7 411 68.6
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 9.7e-151 537.3 408 68.1
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 6.3e-150 534.6 398 67.8
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.1e-149 533.9 396 68.4
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.4e-149 532.7 399 68.2
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 3.1e-149 532.3 400 67.0
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.1e-149 532.3 402 68.9
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 3.5e-148 528.9 345 73.6
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.5e-148 528.9 344 73.5
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.0e-147 527.3 410 66.1
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.3e-147 526.9 371 69.5
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 1.7e-147 526.6 406 65.5
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.2e-147 526.2 294 87.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 2.9e-147 525.8 340 72.6
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 3.8e-147 525.4 411 65.7
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.8e-147 525.4 411 65.7
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.0e-147 525.0 405 64.7
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 8.5e-147 524.2 401 67.1
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.1e-146 523.9 413 66.6
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.5e-146 523.5 395 68.1
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 5.5e-146 521.5 359 70.5
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.6e-145 518.8 394 64.7
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.3e-144 516.2 408 63.5
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 3.0e-144 515.8 403 65.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 3.0e-144 515.8 365 69.9
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 5.2e-144 515.0 342 69.9
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.1e-143 513.8 344 71.8
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.1e-143 513.8 340 72.9
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.1e-143 513.8 404 62.4
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.1e-143 513.8 345 70.7
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.5e-143 513.5 344 72.4
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 2.0e-143 513.1 371 70.4
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 2.0e-143 513.1 413 64.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 3.3e-143 512.3 345 72.5
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 3.3e-143 512.3 345 72.5
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 3.3e-143 512.3 391 65.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 5.7e-143 511.5 413 65.6
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.7e-142 510.0 344 72.1
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 2.2e-142 509.6 379 66.0
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 6.3e-142 508.1 379 66.2
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 8.2e-142 507.7 405 64.7
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.2e-142 507.7 343 69.4
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.1e-141 507.3 347 72.3
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.4e-141 506.9 366 68.3
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.4e-141 506.9 400 65.5
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.8e-141 506.5 401 65.3
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.8e-141 506.5 416 64.9
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 4.1e-141 505.4 345 72.2
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 4.1e-141 505.4 345 72.2
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 4.1e-141 505.4 309 77.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 4.1e-141 505.4 345 70.1
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.3e-141 505.0 401 65.1
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.0e-140 503.1 405 62.0
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 2.0e-140 503.1 411 61.3
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.6e-140 502.7 392 65.8
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 3.5e-140 502.3 400 64.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 5.9e-140 501.5 413 61.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.8e-139 498.8 405 62.2
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.8e-139 498.8 377 66.3
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 2.5e-138 496.1 439 60.6
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 4.2e-138 495.4 386 65.8
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.6e-137 493.4 395 63.8
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 2.1e-137 493.0 342 69.6
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.7e-137 492.7 343 70.0
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.7e-137 491.9 397 61.2
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.5e-135 486.9 363 65.6
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 5.7e-135 485.0 321 71.7
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 9.8e-135 484.2 318 71.4
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 1.3e-134 483.8 346 67.6
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 1.7e-134 483.4 343 69.1
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.8e-134 482.6 317 73.5
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.1e-133 480.7 413 65.4
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.7e-132 476.1 426 58.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 1.1e-130 470.7 342 67.0
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 3.2e-130 469.2 390 62.3
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 7.2e-130 468.0 402 60.9
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 9.4e-130 467.6 345 66.4
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 4.1e-125 452.2 346 65.9
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 9.8e-119 431.0 301 70.4
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 4.9e-118 428.7 350 60.9
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.3e-112 409.8 381 56.4
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.6e-108 395.6 256 74.2
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 3.9e-107 392.5 364 55.2
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.1e-106 391.0 248 75.0
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.2e-103 380.9 249 73.9
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 7.1e-101 371.7 270 68.5
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.7e-99 367.1 358 57.3
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.9e-98 363.6 270 66.7
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.0e-91 341.3 296 61.8
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 1.4e-85 320.9 249 64.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.2e-84 317.8 340 46.5
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.3e-83 314.3 364 44.8
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.4e-69 266.9 342 40.1
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.0e-62 245.0 183 60.7
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 3.4e-47 193.4 124 73.4
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.3e-41 174.9 417 34.3
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 3.4e-39 166.8 188 46.3
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.9e-37 161.0 91 80.2
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-34 151.8 159 50.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.7e-34 148.7 97 74.2
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.8e-32 144.4 151 51.0
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 4.4e-18 96.7 89 57.3
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 3.1e-16 90.5 53 69.8
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.0e-15 87.8 93 49.5


User provided reference genes

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