Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g095270 Medicago truncatula HOM05D005718 ORTHO05D004853 1.5e-98 362.8 178 100.0
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 3.3e-74 282.0 176 77.3
Medtr5g095330 Medicago truncatula HOM05D005718 ORTHO05D004853 2.1e-73 279.3 176 78.4
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 1.3e-70 270.0 176 75.6
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 7.8e-68 260.8 175 73.1
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 1.7e-67 259.6 175 73.1
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 1.8e-64 249.6 164 73.8
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 9.0e-64 247.3 179 69.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 3.2e-53 212.2 174 63.2
Medtr8g009850 Medicago truncatula HOM05D005718 ORTHO05D004853 3.3e-42 175.6 176 55.7
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.9e-38 161.8 172 47.1
Ca_02735_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-37 160.2 179 45.8
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.5e-37 158.3 172 45.9
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.3e-37 157.5 179 44.7
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.3e-37 157.5 172 45.3
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.3e-37 157.5 172 46.5
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.6e-36 156.8 145 52.4
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.6e-36 155.2 172 45.3
Ca_11946_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-35 154.1 172 44.8
Ca_07541_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-35 153.7 145 50.3
Ca_24171_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.8e-35 153.3 145 51.7
Ca_02739_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-34 150.6 172 44.8
Ca_14596_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-34 150.6 145 51.0
Ca_28401_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-34 150.2 172 44.8
Ca_28548_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-34 150.2 172 44.8
Ca_12054_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.9e-34 149.8 171 45.0
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.3e-34 149.1 171 44.4
Ca_02193_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-34 148.3 172 44.8
Ca_20280_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-34 148.3 172 43.6
Ca_23989_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-34 148.3 145 49.7
Ca_27659_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-34 148.3 172 43.0
Ca_05501_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.7e-34 147.5 171 45.0
Ca_28538_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-33 147.1 171 45.0
Ca_20722_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.8e-33 146.0 172 41.9
Ca_20053_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.2e-33 144.4 171 45.0
Ca_26948_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.2e-33 144.4 145 49.0
Ca_26688_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.4e-32 142.9 172 43.0
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.0e-32 141.0 174 43.7
Ca_24064_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-31 140.6 144 47.9
Ca_08870_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-30 136.3 152 45.4
Ca_27133_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.9e-30 136.0 182 42.3
Ca_12947_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-29 134.0 147 44.9
Ca_31245_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.1e-28 129.8 132 48.5
Ca_27856_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.5e-26 122.9 104 56.7
Ca_17770_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-25 120.6 172 39.5
Ca_12320_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-24 117.5 117 48.7
Ca_02192_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.3e-24 115.2 140 42.1
Ca_20096_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.1e-24 114.4 100 53.0
Ca_05339_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-23 114.0 145 41.4
Ca_14760_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-23 114.0 162 40.1
Ca_18815_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-23 114.0 104 54.8
Ca_31163_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-23 113.6 137 43.1
Ca_31178_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-23 113.2 100 55.0
Ca_16582_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.4e-23 112.5 117 47.9
Ca_02986_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.5e-23 112.1 145 42.1
Ca_26301_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-22 110.9 172 36.6
Ca_30720_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-22 110.9 172 36.6
Ca_26515_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.7e-22 110.2 103 53.4
Ca_28531_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.8e-22 109.0 117 47.9
Ca_30618_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.8e-22 109.0 117 47.9
Ca_05037_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.1e-21 107.5 147 41.5
Ca_02606_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.5e-21 105.1 93 53.8
Ca_26864_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.7e-20 102.1 90 54.4
Glyma.09G117500 Glycine max HOM05D005718 ORTHO05D004853 1.7e-17 93.6 168 32.1
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 3.7e-17 92.4 175 33.1
TPR.G18912 Trifolium pratense HOM05D005718 ORTHO05D004853 3.7e-17 92.4 176 30.7
TPR.G30973 Trifolium pratense HOM05D005718 ORTHO05D004853 6.3e-17 91.7 182 31.9
Ca_13849_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.8e-16 90.1 109 41.3
Ca_05382_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.1e-16 87.8 114 42.1
Ca_12435_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-15 87.4 83 51.8
VMungo0464G1989 Vigna mungo HOM05D009155 ORTHO05D004853 1.5e-15 87.0 146 31.5
Ca_27912_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.6e-15 86.3 78 51.3
Ca_30018_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.6e-15 86.3 78 51.3
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 2.6e-15 86.3 166 30.1
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 2.6e-15 86.3 150 30.0
arahy.Tifrunner.gnm1.ann1.N9HB9M Arachis hypogaea HOM05D005718 ORTHO05D004853 4.5e-15 85.5 160 36.2
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 4.5e-15 85.5 150 31.3
Ca_31241_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.7e-15 84.7 109 39.4
Ca_03264_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-14 84.3 108 39.8
Ca_27507_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-14 84.3 78 52.6
VMungo0251G0612 Vigna mungo HOM05D009155 ORTHO05D004853 1.7e-14 83.6 145 31.0
Ca_30769_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-14 83.2 70 57.1
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 2.2e-14 83.2 150 28.7
VMungo0647G1817 Vigna mungo HOM05D009155 ORTHO05D004853 5.0e-14 82.0 145 29.0
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 1.1e-13 80.9 146 32.2
VMungo0720G2649 Vigna mungo HOM05D009155 ORTHO05D004853 1.4e-13 80.5 130 29.2
Medtr1g044605 Medicago truncatula HOM05D012339 ORTHO05D004853 1.9e-13 80.1 183 33.9
VMungo1127G0620 Vigna mungo HOM05D009155 ORTHO05D004853 1.9e-13 80.1 146 30.8
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 3.2e-13 79.3 146 31.5
TPR.G14209 Trifolium pratense HOM05D012339 ORTHO05D004853 5.5e-13 78.6 173 33.5
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 7.2e-13 78.2 146 29.5
Medtr6g088860 Medicago truncatula HOM05D012339 ORTHO05D004853 1.2e-12 77.4 183 32.8
Medtr6g466450 Medicago truncatula HOM05D012339 ORTHO05D004853 1.2e-12 77.4 183 32.8
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 2.7e-12 76.3 171 28.7
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 2.7e-12 76.3 175 29.1
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 3.6e-12 75.9 170 25.3
Medtr8g056180 Medicago truncatula HOM05D012339 ORTHO05D004853 3.6e-12 75.9 183 33.3
Ca_20721_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.0e-12 74.7 174 32.2
arahy.Tifrunner.gnm1.ann1.VX3S13 Arachis hypogaea HOM05D005718 ORTHO05D004853 3.0e-11 72.8 144 27.1
VMungo0647G1872 Vigna mungo HOM05D009155 ORTHO05D004853 3.9e-11 72.4 118 31.4
Medtr5g039510 Medicago truncatula HOM05D005718 ORTHO05D004853 5.2e-11 72.0 158 29.7
Medtr5g079810 Medicago truncatula HOM05D012339 ORTHO05D004853 5.2e-11 72.0 148 34.5
Medtr6g033460 Medicago truncatula HOM05D008332 ORTHO05D010135 1.5e-10 70.5 158 27.8
Medtr7g070630 Medicago truncatula HOM05D012339 ORTHO05D004853 1.5e-10 70.5 148 33.1
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.0e-10 70.1 153 29.4
Ca_05853_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.4e-10 68.9 80 42.5
Ca_03856_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-10 68.6 98 36.7
Ca_30629_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.7e-10 68.6 98 36.7
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.7e-10 68.6 153 29.4
Medtr0126s0010 Medicago truncatula HOM05D012339 ORTHO05D004853 7.4e-10 68.2 131 33.6
Oeu063638.1 Olea europaea HOM05D007234 ORTHO05D008488 2.2e-09 66.6 150 30.7
Oeu045905.1 Olea europaea HOM05D007234 ORTHO05D008488 2.8e-09 66.2 150 30.7
Medtr8g469580 Medicago truncatula HOM05D012339 ORTHO05D004853 3.7e-09 65.9 152 28.9
PGSC0003DMG400037716 Solanum tuberosum HOM05D003150 ORTHO05D003532 4.8e-09 65.5 129 31.8
Medtr6g023550 Medicago truncatula HOM05D005718 ORTHO05D004853 6.3e-09 65.1 157 27.4
Oeu048494.1 Olea europaea HOM05D007234 ORTHO05D008488 8.2e-09 64.7 150 30.7
Medtr6g065960 Medicago truncatula HOM05D012339 ORTHO05D004853 1.1e-08 64.3 127 33.1
Oeu036146.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-08 64.3 150 30.0
Oeu040314.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-08 64.3 150 30.0
Oeu012540.1 Olea europaea HOM05D007234 ORTHO05D008488 1.4e-08 63.9 170 30.6
PGSC0003DMG400046215 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.4e-08 63.9 129 30.2
Medtr3g080720 Medicago truncatula HOM05D012339 ORTHO05D004853 1.8e-08 63.5 142 32.4
PGSC0003DMG400047132 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.3e-08 62.0 137 30.7
Oeu049634.1 Olea europaea HOM05D007234 ORTHO05D008488 7.0e-08 61.6 150 28.7
Oeu046571.1 Olea europaea HOM05D007234 ORTHO05D008488 9.1e-08 61.2 154 29.9
TPR.G11408 Trifolium pratense HOM05D013524 ORTHO05D004853 1.2e-07 60.8 144 31.9
Ca_28015_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.6e-07 60.5 85 35.3
PGSC0003DMG400040678 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.6e-07 60.5 122 32.0
Gohir.D09G037250 Gossypium hirsutum HOM05D013638 ORTHO05D016332 2.0e-07 60.1 121 31.4
PGSC0003DMG400039545 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.0e-07 60.1 135 28.9
Oeu050318.1 Olea europaea HOM05D007234 ORTHO05D008488 2.6e-07 59.7 150 29.3
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-07 59.3 129 30.2
Phvul.005G066300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.5e-07 58.9 157 22.3
Phvul.004G109100 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.9e-07 58.5 127 24.4
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.9e-07 58.5 129 31.0
Oeu046272.1 Olea europaea HOM05D007234 ORTHO05D008488 1.3e-06 57.4 150 28.0
Oeu049373.1 Olea europaea HOM05D007234 ORTHO05D008488 1.3e-06 57.4 150 28.0
VMungo1309G1998 Vigna mungo HOM05D000001 ORTHO05D009144 1.3e-06 57.4 98 34.7
Oeu017565.1 Olea europaea HOM05D007234 ORTHO05D008488 1.7e-06 57.0 150 27.3
VMungo0331G1323 Vigna mungo HOM05D009155 ORTHO05D004853 3.8e-06 55.8 141 28.4
Nitab4.5_0004673g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 5.0e-06 55.5 128 27.3
PGSC0003DMG400034976 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-06 55.1 123 28.5
PGSC0003DMG400039577 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.5e-06 55.1 119 31.1
Oeu017546.1 Olea europaea HOM05D007234 ORTHO05D008488 8.5e-06 54.7 156 28.2


User provided reference genes

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