Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 1.5e-76 289.7 165 100.0
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 4.7e-75 284.6 165 98.8
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 6.0e-30 134.8 166 59.6
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 6.0e-30 134.8 198 52.0
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 2.1e-27 126.3 166 56.0
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 2.1e-27 126.3 166 56.0
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 6.2e-27 124.8 166 55.4
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 4.9e-24 115.2 174 52.9
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 2.2e-16 89.7 105 47.6
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 1.9e-15 86.7 99 48.5
TPR.G1196 Trifolium pratense HOM05D008051 ORTHO05D009905 2.1e-14 83.2 93 53.8
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 3.0e-13 79.3 143 51.7
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 4.8e-11 72.0 103 41.7
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 6.9e-10 68.2 99 42.4
Medtr8g442580 Medicago truncatula HOM05D008051 ORTHO05D009905 6.9e-10 68.2 70 45.7
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 2.0e-09 66.6 103 38.8
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 4.5e-09 65.5 94 38.3
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 4.5e-09 65.5 99 42.4
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 5.8e-09 65.1 89 40.4
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 5.8e-09 65.1 93 38.7
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 1.3e-08 63.9 103 37.9
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 1.7e-08 63.5 78 41.0
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 1.7e-08 63.5 90 35.6
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 1.7e-08 63.5 102 36.3
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 2.2e-08 63.2 50 58.0
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 3.8e-08 62.4 88 38.6
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 4.9e-08 62.0 103 35.9
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 6.5e-08 61.6 51 54.9
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 8.4e-08 61.2 98 36.7
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 8.4e-08 61.2 90 34.4
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 1.4e-07 60.5 95 38.9
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 1.4e-07 60.5 92 34.8
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 4.2e-07 58.9 87 33.3
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 7.1e-07 58.2 94 39.4
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 9.3e-07 57.8 44 56.8
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 1.6e-06 57.0 99 36.4
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 2.1e-06 56.6 93 37.6
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 2.1e-06 56.6 101 34.7
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 2.1e-06 56.6 90 32.2
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 3.5e-06 55.8 43 53.5
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 7.9e-06 54.7 90 34.4
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 7.9e-06 54.7 98 39.8


User provided reference genes

Program Settings