Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 6.3e-279 963.4 462 100.0
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 7.1e-238 827.0 467 85.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.3e-234 816.2 469 85.3
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 4.9e-231 804.3 451 86.5
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.2e-210 735.7 467 74.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 9.0e-209 730.3 467 75.2
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 2.7e-205 718.8 468 73.9
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.1e-203 713.4 467 74.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 9.7e-203 710.3 464 74.1
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.8e-196 689.5 432 76.9
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.0e-179 632.9 451 68.3
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 4.8e-178 628.2 451 67.6
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 3.1e-177 625.5 448 67.4
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 9.1e-177 624.0 436 68.8
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 2.0e-176 622.9 456 65.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.7e-176 622.5 422 70.6
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.3e-175 620.2 430 68.6
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 6.5e-175 617.8 447 66.4
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 6.5e-175 617.8 441 67.1
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.9e-174 616.3 435 66.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.9e-174 616.3 448 66.5
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 9.4e-174 614.0 430 66.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 9.4e-174 614.0 445 66.7
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 6.1e-173 611.3 441 65.3
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 6.1e-173 611.3 452 66.6
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.0e-172 610.5 423 66.2
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.4e-172 610.1 434 65.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.8e-172 607.8 463 64.6
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 6.8e-172 607.8 433 65.6
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.0e-171 606.3 462 64.7
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.0e-171 606.3 424 67.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.6e-171 605.9 447 65.3
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.4e-171 605.5 415 69.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.4e-171 605.1 423 66.2
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.8e-171 604.0 462 63.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.7e-170 602.1 432 65.5
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 4.9e-170 601.7 418 67.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 8.3e-170 600.9 432 65.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.1e-169 600.5 436 65.4
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.4e-169 600.1 433 66.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 4.1e-169 598.6 455 64.0
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.2e-168 597.0 391 70.3
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.6e-168 596.7 401 67.1
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.7e-168 595.9 426 66.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 2.3e-167 592.8 398 69.8
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.8e-167 592.0 406 67.7
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 3.3e-166 589.0 466 62.2
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.3e-166 588.6 445 64.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 4.7e-165 585.1 401 68.1
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 6.1e-165 584.7 446 63.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.8e-164 583.2 432 64.1
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 3.0e-164 582.4 434 64.3
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.2e-163 580.5 418 65.1
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.5e-163 580.1 417 65.7
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.7e-162 576.6 424 64.2
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 3.7e-162 575.5 417 64.5
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 5.9e-160 568.2 436 61.7
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.0e-159 565.8 451 59.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.0e-159 565.8 410 65.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 5.0e-159 565.1 424 63.0
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 6.6e-159 564.7 423 63.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 6.6e-159 564.7 423 63.4
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 6.6e-159 564.7 423 63.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.6e-159 564.7 409 65.3
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.6e-157 560.1 423 63.1
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 8.0e-157 557.8 450 60.7
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.2e-155 553.9 356 74.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.1e-153 547.4 440 60.5
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 9.2e-153 544.3 420 62.6
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.0e-151 540.8 432 61.3
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.1e-150 537.3 462 57.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 7.3e-150 534.6 446 59.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.2e-149 531.6 398 64.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 2.4e-145 519.6 439 58.5
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.1e-142 510.8 404 61.4
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.1e-140 502.7 411 57.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.2e-140 501.9 462 55.8
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.7e-138 496.9 450 56.4
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 8.4e-138 494.6 388 58.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.1e-137 494.2 314 70.7
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.4e-137 493.8 418 58.6
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.5e-136 489.2 423 57.7
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.3e-135 486.5 422 55.9
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.1e-134 484.2 442 53.8
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 7.8e-128 461.5 332 67.8
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 2.3e-127 459.9 357 63.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.1e-125 451.4 399 58.4
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.3e-124 448.7 382 59.7
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.9e-124 448.4 412 57.3
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.6e-123 446.4 335 63.9
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.0e-119 434.5 327 63.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 5.6e-118 428.7 424 49.8
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 3.1e-116 422.9 336 62.5
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.9e-100 368.6 226 73.9
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-93 346.7 226 69.9
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.3e-85 321.2 247 67.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 8.2e-77 292.0 236 61.0
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.2e-70 271.6 197 64.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.2e-61 240.7 384 36.5
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.8e-55 218.8 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.8e-55 218.8 130 78.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 5.7e-46 189.5 164 56.1
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 4.1e-44 183.3 350 34.3
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 5.4e-36 156.4 172 47.7
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.1e-31 140.6 172 47.7
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.1e-31 140.6 172 47.7
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.5e-30 138.3 128 50.0
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.0e-26 125.6 70 84.3
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.5e-22 111.7 94 55.3
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.4e-20 104.4 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.0e-18 99.0 75 61.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 2.0e-14 84.7 542 20.1
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 7.6e-14 82.8 204 30.9
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.7e-13 81.6 203 30.0
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 2.9e-13 80.9 200 30.5
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.0e-11 73.2 75 46.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 5.8e-06 56.6 77 39.0


User provided reference genes

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