Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g080920 Medicago truncatula HOM05D000963 ORTHO05D010658 4.0e-66 254.6 126 100.0
Medtr3g035630 Medicago truncatula HOM05D000963 ORTHO05D010658 4.7e-43 177.9 90 96.7
arahy.Tifrunner.gnm1.ann1.DAER0W Arachis hypogaea HOM05D000963 ORTHO05D010658 3.4e-41 171.8 131 71.0
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 1.2e-38 163.3 109 75.2
arahy.Tifrunner.gnm1.ann1.I408H5 Arachis hypogaea HOM05D000963 ORTHO05D010658 5.6e-36 154.5 105 77.1
arahy.Tifrunner.gnm1.ann1.370AP4 Arachis hypogaea HOM05D000963 ORTHO05D010658 1.6e-35 152.9 101 76.2
arahy.Tifrunner.gnm1.ann1.ZKSG0L Arachis hypogaea HOM05D000963 ORTHO05D010658 1.2e-33 146.7 97 79.4
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.1e-23 113.6 81 69.1
ClCG02G009770 Citrullus lanatus HOM05D000963 ORTHO05D010658 4.2e-23 111.7 62 85.5
ClCG02G009780 Citrullus lanatus HOM05D000445 ORTHO05D010658 4.2e-23 111.7 62 85.5
Gohir.1Z049682 Gossypium hirsutum HOM05D000963 ORTHO05D010658 7.1e-23 110.9 110 57.3
SGA_v2.0_scaffold27G11532 Striga asiatica HOM05D000963 ORTHO05D010658 2.7e-22 109.0 60 86.7
arahy.Tifrunner.gnm1.ann1.7QN223 Arachis hypogaea HOM05D000963 ORTHO05D010658 3.5e-22 108.6 97 58.8
SalBow1G2464 Salvia bowleyana HOM05D000963 ORTHO05D010658 1.7e-21 106.3 59 86.4
Gohir.A01G104150 Gossypium hirsutum HOM05D000963 ORTHO05D010658 3.0e-21 105.5 54 94.4
arahy.Tifrunner.gnm1.ann1.TKHQ8A Arachis hypogaea HOM05D000963 ORTHO05D010658 5.1e-21 104.8 103 56.3
Gohir.1Z050102 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
Gohir.A04G039301 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
Gohir.A04G039551 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
Gohir.A05G323740 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
Gohir.A09G103380 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
Gohir.D03G075504 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.7e-21 104.0 54 92.6
LjContig00319g0015871 Lotus japonicus HOM05D000963 ORTHO05D010658 8.7e-21 104.0 53 92.5
Medtr1g015430 Medicago truncatula HOM05D000963 ORTHO05D010658 2.5e-20 102.4 59 79.7
Gohir.A02G134103 Gossypium hirsutum HOM05D000963 ORTHO05D010658 3.3e-20 102.1 53 92.5
Gohir.A08G075850 Gossypium hirsutum HOM05D000963 ORTHO05D010658 7.3e-20 100.9 54 88.9
Gohir.A01G112650 Gossypium hirsutum HOM05D000963 ORTHO05D010658 9.6e-20 100.5 54 88.9
Gohir.A04G047601 Gossypium hirsutum HOM05D000963 ORTHO05D010658 9.6e-20 100.5 54 88.9
Psat0s9163g0040 Pisum sativum HOM05D000963 ORTHO05D010658 1.3e-19 100.1 55 85.5
Gohir.D11G275950 Gossypium hirsutum HOM05D000963 ORTHO05D010658 2.8e-19 99.0 54 90.7
arahy.Tifrunner.gnm1.ann1.DB5V97 Arachis hypogaea HOM05D000963 ORTHO05D010658 3.6e-19 98.6 57 80.7
Gohir.A13G086650 Gossypium hirsutum HOM05D000963 ORTHO05D010658 3.6e-19 98.6 54 87.0
Gohir.A05G323084 Gossypium hirsutum HOM05D000963 ORTHO05D010658 3.1e-18 95.5 51 88.2
Gohir.A09G101180 Gossypium hirsutum HOM05D000963 ORTHO05D010658 5.3e-18 94.7 51 88.2
Gohir.D12G236701 Gossypium hirsutum HOM05D000963 ORTHO05D010658 4.4e-17 91.7 54 79.6
Gohir.A10G121250 Gossypium hirsutum HOM05D000963 ORTHO05D010658 8.4e-16 87.4 51 82.4
arahy.Tifrunner.gnm1.ann1.PTC7HC Arachis hypogaea HOM05D000963 ORTHO05D010658 4.2e-15 85.1 58 70.7
arahy.Tifrunner.gnm1.ann1.4MXC2X Arachis hypogaea HOM05D000388 ORTHO05D000473 7.1e-15 84.3 82 57.3
Oeu012822.1 Olea europaea HOM05D000963 ORTHO05D010658 2.3e-13 79.3 50 74.0
Gohir.D09G040020 Gossypium hirsutum HOM05D000963 ORTHO05D010658 1.9e-12 76.3 105 43.8
TPR.G36534 Trifolium pratense HOM05D000963 ORTHO05D010658 1.9e-12 76.3 45 80.0
Gohir.A09G039230 Gossypium hirsutum HOM05D000963 ORTHO05D010658 2.5e-12 75.9 54 68.5
arahy.Tifrunner.gnm1.ann1.6B0E0P Arachis hypogaea HOM05D000963 ORTHO05D010658 9.6e-12 73.9 41 82.9
Sc12g0010470 Simmondsia chinensis HOM05D000963 ORTHO05D010658 2.8e-11 72.4 41 80.5
arahy.Tifrunner.gnm1.ann1.BDU9B8 Arachis hypogaea HOM05D000216 ORTHO05D001131 4.8e-11 71.6 57 64.9
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 4.8e-11 71.6 48 72.9
arahy.Tifrunner.gnm1.ann1.C05VI8 Arachis hypogaea HOM05D000963 ORTHO05D010658 3.1e-10 68.9 34 94.1
arahy.Tifrunner.gnm1.ann1.7470WV Arachis hypogaea HOM05D000963 ORTHO05D010658 2.6e-09 65.9 34 88.2
arahy.Tifrunner.gnm1.ann1.HP88CG Arachis hypogaea HOM05D000806 ORTHO05D002320 5.8e-09 64.7 34 88.2
arahy.Tifrunner.gnm1.ann1.CIBD1H Arachis hypogaea HOM05D000963 ORTHO05D010658 6.4e-08 61.2 44 65.9


User provided reference genes

Program Settings