Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g077570 Medicago truncatula HOM05D000193 ORTHO05D266016 6.4e-41 170.2 82 100.0
Psat7g081600 Pisum sativum HOM05D000193 ORTHO05D000776 1.2e-07 59.7 66 51.5
VMungo0251G1308 Vigna mungo HOM05D000193 ORTHO05D000776 2.1e-07 58.9 66 50.0
Glyma.09G087200 Glycine max HOM05D000193 ORTHO05D000776 3.5e-07 58.2 66 50.0
Lalb_Chr07g0187581 Lupinus albus HOM05D000193 ORTHO05D000776 6.1e-07 57.4 66 48.5
Ca_18166_v3 Cicer arietinum L. HOM05D000193 ORTHO05D000776 7.9e-07 57.0 59 55.9
VMungo1309G2265 Vigna mungo HOM05D000193 ORTHO05D000776 1.0e-06 56.6 66 48.5
VMungo1309G2490 Vigna mungo HOM05D000193 ORTHO05D000776 1.0e-06 56.6 66 48.5
Ca_02552_v3 Cicer arietinum L. HOM05D000193 ORTHO05D000776 1.3e-06 56.2 66 48.5
Medtr2g049020 Medicago truncatula HOM05D000193 ORTHO05D000776 1.3e-06 56.2 66 48.5
TPR.G25731 Trifolium pratense HOM05D000193 ORTHO05D000776 1.3e-06 56.2 66 48.5
TPR.G33392 Trifolium pratense HOM05D000193 ORTHO05D000776 1.3e-06 56.2 66 48.5
Lj4g0008248 Lotus japonicus HOM05D000193 ORTHO05D000776 1.8e-06 55.8 66 48.5
Phvul.002G180200 Phaseolus vulgaris HOM05D000193 ORTHO05D000776 1.8e-06 55.8 66 48.5
TPR.G9579 Trifolium pratense HOM05D000193 ORTHO05D000776 1.8e-06 55.8 66 48.5
Lj6g0026473 Lotus japonicus HOM05D000193 ORTHO05D000776 2.3e-06 55.5 66 48.5
Phvul.009G210200 Phaseolus vulgaris HOM05D000193 ORTHO05D000776 2.3e-06 55.5 66 47.0
Lj6g0024677 Lotus japonicus HOM05D000193 ORTHO05D000776 3.0e-06 55.1 66 47.0
Phvul.009G216100 Phaseolus vulgaris HOM05D000193 ORTHO05D000776 3.0e-06 55.1 66 48.5
TPR.G9565 Trifolium pratense HOM05D000193 ORTHO05D000776 3.9e-06 54.7 59 52.5
Ca_02555_v3 Cicer arietinum L. HOM05D000193 ORTHO05D000776 5.1e-06 54.3 66 47.0
Lalb_Chr11g0073391 Lupinus albus HOM05D000193 ORTHO05D000776 5.1e-06 54.3 66 45.5
TPR.G22701 Trifolium pratense HOM05D000193 ORTHO05D000776 5.1e-06 54.3 66 47.0
arahy.Tifrunner.gnm1.ann1.FRHN34 Arachis hypogaea HOM05D000193 ORTHO05D000776 6.7e-06 53.9 66 45.5
arahy.Tifrunner.gnm1.ann1.T3KBEX Arachis hypogaea HOM05D000193 ORTHO05D000776 6.7e-06 53.9 66 45.5


User provided reference genes

Program Settings