Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 4.6e-130 468.0 256 100.0
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 2.2e-95 352.8 247 76.1
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 8.4e-55 218.0 201 62.2
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 9.0e-49 198.0 158 66.5
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-48 196.4 158 65.2
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 1.4e-46 190.7 174 58.6
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 4.2e-46 189.1 192 54.2
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 5.4e-46 188.7 166 60.2
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-45 187.6 178 57.3
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.6e-45 187.2 170 59.4
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 3.5e-45 186.0 157 62.4
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 1.3e-44 184.1 170 58.8
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 1.3e-44 184.1 158 62.7
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 1.7e-44 183.7 189 55.0
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-44 183.7 171 58.5
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 2.3e-44 183.3 154 63.0
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 3.0e-44 183.0 153 59.5
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 3.9e-44 182.6 170 57.6
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 3.9e-44 182.6 172 57.0
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 6.6e-44 181.8 176 59.7
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 2.5e-43 179.9 186 54.3
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 3.3e-43 179.5 154 59.7
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 3.3e-43 179.5 224 48.2
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 4.3e-43 179.1 185 53.0
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.3e-43 179.1 158 58.9
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 5.6e-43 178.7 158 60.1
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 1.3e-42 177.6 158 58.9
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-42 177.2 158 57.6
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.6e-42 177.2 166 56.0
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.8e-42 175.6 164 54.9
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 6.9e-41 171.8 158 56.3
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 6.9e-41 171.8 159 57.9
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 6.9e-41 171.8 167 59.3
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 1.2e-40 171.0 186 52.7
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 1.5e-40 170.6 157 58.0
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 2.0e-40 170.2 195 49.2
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-39 165.6 160 55.6
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-38 164.5 140 62.1
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 2.4e-38 163.3 195 51.3
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.4e-38 163.3 175 53.7
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 5.4e-38 162.2 155 55.5
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 6.0e-37 158.7 160 56.2
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 7.9e-37 158.3 205 47.8
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.8e-36 157.1 155 54.2
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 6.7e-36 155.2 209 50.2
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 3.3e-35 152.9 142 57.7
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.4e-35 151.8 163 50.3
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 9.6e-35 151.4 182 47.3
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 1.6e-34 150.6 160 53.8
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 1.8e-33 147.1 158 52.5
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 3.1e-33 146.4 159 52.8
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 5.3e-33 145.6 169 50.9
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.5e-32 144.1 141 53.9
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 4.5e-32 142.5 172 51.2
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 4.5e-32 142.5 196 44.9
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 2.2e-31 140.2 162 48.8
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 8.4e-31 138.3 193 43.5
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.1e-30 137.9 180 48.3
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.9e-30 137.1 187 43.9
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.9e-30 137.1 221 42.5
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 3.2e-30 136.3 162 47.5
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.2e-30 136.0 183 44.8
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 9.3e-30 134.8 156 46.8
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 5.1e-28 129.0 170 48.2
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 3.3e-27 126.3 128 53.9
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 7.4e-27 125.2 123 52.0
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 2.4e-25 120.2 123 50.4
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 2.4e-25 120.2 154 45.5
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 3.2e-22 109.8 177 41.8
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 1.6e-21 107.5 127 48.0
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 2.7e-21 106.7 182 41.2
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 5.1e-20 102.4 166 41.6
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 6.7e-20 102.1 167 41.3
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 1.5e-19 100.9 164 39.0
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 1.9e-19 100.5 148 40.5
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 1.3e-18 97.8 164 40.2
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 1.6e-18 97.4 223 38.6
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 6.3e-18 95.5 149 35.6
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 6.3e-18 95.5 149 35.6
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 3.1e-17 93.2 160 41.2
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 3.1e-17 93.2 148 38.5
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 6.9e-17 92.0 173 39.3
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 6.9e-17 92.0 141 43.3
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 9.0e-17 91.7 162 37.0
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-16 91.3 171 39.2
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 5.9e-16 89.0 153 35.9
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 7.7e-16 88.6 107 45.8
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 1.0e-15 88.2 176 33.5
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 2.9e-15 86.7 146 37.0
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 5.0e-15 85.9 153 38.6
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 1.4e-14 84.3 139 34.5
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 7.2e-14 82.0 162 33.3
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 7.2e-14 82.0 82 59.8
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 9.4e-14 81.6 87 57.5
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 1.6e-13 80.9 200 33.0
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 2.7e-13 80.1 118 45.8
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 3.6e-13 79.7 155 38.1
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 3.6e-13 79.7 181 31.5
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 1.0e-12 78.2 74 52.7
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.8e-12 77.4 194 31.4
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 8.8e-12 75.1 68 58.8
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 3.3e-11 73.2 66 57.6
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 1.3e-10 71.2 79 45.6
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.7e-10 69.7 64 57.8
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 1.8e-09 67.4 66 59.1
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 1.2e-08 64.7 87 40.2
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 1.5e-08 64.3 123 34.1
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 7.7e-08 62.0 72 51.4
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 1.7e-07 60.8 47 61.7
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 2.2e-07 60.5 166 27.1
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.9e-06 57.4 40 62.5
arahy.Tifrunner.gnm1.ann1.WU1DK0 Arachis hypogaea HOM05D028262 ORTHO05D087405 7.2e-06 55.5 192 26.0


User provided reference genes

Program Settings