Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-136 490.0 245 100.0
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 2.9e-97 359.0 247 76.1
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 4.8e-60 235.3 246 56.5
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 9.5e-48 194.5 235 49.4
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 8.0e-47 191.4 173 58.4
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 8.0e-47 191.4 172 59.9
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.0e-46 191.0 180 55.0
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 1.4e-46 190.7 162 61.7
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.8e-46 190.3 160 60.0
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 1.8e-46 190.3 172 59.3
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 2.3e-46 189.9 160 62.5
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 2.3e-46 189.9 175 58.3
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 6.8e-46 188.3 160 61.9
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 6.8e-46 188.3 160 60.6
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 8.9e-46 188.0 160 60.6
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 2.0e-45 186.8 160 62.5
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 2.0e-45 186.8 166 60.2
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 2.6e-45 186.4 159 60.4
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 3.4e-45 186.0 160 60.0
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 4.4e-45 185.7 175 55.4
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 4.4e-45 185.7 175 59.4
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 7.5e-45 184.9 180 55.6
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 1.7e-44 183.7 188 54.8
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 2.2e-44 183.3 169 58.6
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 3.7e-44 182.6 177 57.1
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 6.4e-44 181.8 172 57.0
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 8.3e-44 181.4 191 53.9
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 8.3e-44 181.4 205 50.2
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-43 180.6 200 51.0
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 9.2e-43 177.9 189 53.4
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 2.7e-42 176.4 164 57.9
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 1.3e-41 174.1 191 51.3
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 1.3e-41 174.1 172 55.8
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.9e-41 172.6 172 55.2
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 5.0e-41 172.2 186 51.6
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 6.6e-41 171.8 172 54.1
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 9.5e-40 167.9 203 49.3
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-39 166.4 126 64.3
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 3.6e-39 166.0 193 48.2
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 3.4e-37 159.5 162 51.9
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.4e-37 159.5 161 55.3
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.3e-36 157.5 162 51.2
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 1.7e-36 157.1 195 46.7
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.2e-36 156.8 159 55.3
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 2.9e-36 156.4 163 53.4
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 3.7e-36 156.0 212 49.5
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-36 155.6 178 52.2
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-36 155.6 244 42.2
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 1.1e-35 154.5 201 45.8
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.4e-35 154.1 157 55.4
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 3.2e-35 152.9 132 59.8
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 4.1e-35 152.5 172 52.9
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 1.3e-33 147.5 167 49.7
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 3.3e-32 142.9 190 43.2
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.3e-32 142.9 144 52.8
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 7.3e-32 141.7 164 47.0
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 9.5e-32 141.4 184 44.0
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.2e-31 141.0 155 50.3
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-31 140.2 161 49.7
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-31 139.8 161 49.1
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 4.7e-31 139.0 166 45.8
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 6.2e-31 138.7 163 51.5
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 8.1e-31 138.3 132 59.1
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 3.4e-29 132.9 191 42.9
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 1.3e-28 131.0 223 39.5
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.7e-28 130.6 155 51.6
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.4e-27 126.7 159 45.9
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 1.5e-24 117.5 156 42.9
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 2.5e-24 116.7 223 38.1
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 7.3e-24 115.2 125 48.8
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 3.6e-23 112.8 153 39.2
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 3.6e-23 112.8 153 39.2
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 6.2e-23 112.1 117 50.4
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 6.2e-23 112.1 162 40.1
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 1.8e-22 110.5 160 39.4
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 2.4e-22 110.2 178 41.0
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 4.0e-22 109.4 157 43.3
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 1.2e-21 107.8 126 51.6
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 2.6e-21 106.7 140 40.7
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 2.9e-20 103.2 175 40.6
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 2.9e-20 103.2 146 41.1
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 2.9e-20 103.2 95 57.9
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 1.1e-19 101.3 157 42.0
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 1.1e-19 101.3 153 40.5
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 1.1e-19 101.3 156 41.0
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 1.6e-18 97.4 167 38.9
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 2.1e-18 97.1 160 35.0
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 3.5e-18 96.3 167 37.7
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.3e-17 94.4 163 38.7
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 3.0e-17 93.2 163 38.7
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 3.0e-17 93.2 160 36.2
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 3.0e-17 93.2 129 39.5
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 3.9e-17 92.8 149 40.9
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 2.5e-16 90.1 68 69.1
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 2.1e-15 87.0 117 45.3
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 6.2e-15 85.5 122 44.3
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.1e-14 83.2 68 61.8
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 5.2e-14 82.4 174 36.2
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 2.6e-13 80.1 213 29.6
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 4.4e-13 79.3 74 54.1
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 1.3e-12 77.8 168 31.5
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 8.4e-12 75.1 64 57.8
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 3.2e-11 73.2 97 49.5
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 3.5e-10 69.7 66 57.6
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 6.0e-10 68.9 71 50.7
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 1.0e-09 68.2 74 44.6
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 2.3e-09 67.0 47 61.7
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 6.6e-09 65.5 89 36.0
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-08 64.7 80 42.5
Medtr5g073850 Medicago truncatula HOM05D000081 ORTHO05D014784 4.3e-08 62.8 161 29.8
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 5.6e-08 62.4 107 34.6
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 1.6e-07 60.8 72 51.4
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.1e-06 58.2 39 61.5
Glyma.14G199300 Glycine max HOM05D000139 ORTHO05D029709 2.4e-06 57.0 54 44.4
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.1e-06 56.6 180 31.1
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 3.1e-06 56.6 53 54.7
Lalb_Chr02g0160091 Lupinus albus HOM05D000139 ORTHO05D020776 6.9e-06 55.5 57 50.9


User provided reference genes

Program Settings