Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 3.8e-154 548.1 273 100.0
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 1.7e-93 346.7 276 66.3
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 9.1e-92 340.9 269 66.5
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 4.9e-69 265.4 278 54.0
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 2.3e-66 256.5 288 52.1
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-66 255.4 277 53.8
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-64 250.8 274 50.7
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 2.3e-63 246.5 291 50.9
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-62 243.0 235 57.9
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 9.8e-62 241.1 275 50.2
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 1.7e-61 240.4 279 51.6
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 1.4e-60 237.3 302 47.7
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 1.9e-60 236.9 287 48.1
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 2.4e-60 236.5 277 50.2
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-59 233.8 271 50.9
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 1.6e-59 233.8 263 51.0
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 2.3e-58 229.9 190 63.2
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 5.6e-57 225.3 264 45.8
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 6.2e-56 221.9 267 47.6
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.3e-53 214.2 306 41.2
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 2.9e-53 213.0 264 45.1
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 4.9e-53 212.2 264 49.2
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 4.9e-53 212.2 275 46.5
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 8.3e-53 211.5 295 44.7
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-52 210.7 292 46.6
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-52 210.7 142 71.1
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 2.1e-51 206.8 269 44.6
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.0e-50 203.0 291 45.0
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 2.5e-49 199.9 274 47.8
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 4.3e-49 199.1 312 40.7
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-48 196.4 288 44.8
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 4.7e-48 195.7 286 43.7
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-47 194.1 274 47.1
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 4.0e-47 192.6 250 47.2
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.5e-46 190.7 142 64.1
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 9.9e-46 188.0 320 40.0
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 3.8e-45 186.0 141 63.8
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 9.3e-44 181.4 283 42.4
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 1.7e-42 177.2 283 41.7
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 1.7e-42 177.2 165 58.2
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 6.6e-42 175.3 176 59.7
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.9e-41 173.7 177 59.3
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 5.6e-41 172.2 140 60.7
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.3e-41 171.8 288 40.3
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-40 169.9 261 43.3
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-39 167.5 292 39.4
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.1e-39 166.4 207 47.8
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 4.0e-39 166.0 144 58.3
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.5e-38 164.1 265 40.8
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 3.4e-38 162.9 256 39.5
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.4e-38 162.5 155 56.1
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 9.9e-38 161.4 139 59.0
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 1.7e-37 160.6 225 42.7
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 3.8e-37 159.5 256 38.7
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.4e-37 158.3 189 47.6
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 1.4e-36 157.5 142 57.7
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 1.2e-35 154.5 145 57.2
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-35 154.1 132 59.8
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.7e-35 153.3 193 44.0
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.8e-35 151.8 169 52.7
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.8e-35 151.8 306 38.2
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.0e-34 151.4 126 58.7
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.1e-34 149.1 146 51.4
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 2.5e-33 146.7 203 42.9
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.3e-32 144.4 126 57.1
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 1.3e-32 144.4 205 44.9
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-32 143.3 255 40.0
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 8.1e-32 141.7 219 39.7
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 5.3e-31 139.0 225 39.6
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 2.2e-29 133.7 145 49.7
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.2e-29 133.7 235 37.0
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 3.5e-27 126.3 129 49.6
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 1.3e-26 124.4 142 44.4
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 3.0e-26 123.2 145 47.6
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 1.5e-25 120.9 139 49.6
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 1.5e-25 120.9 153 43.1
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 1.5e-25 120.9 150 42.0
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 2.5e-25 120.2 142 51.4
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 5.6e-25 119.0 129 46.5
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-24 117.5 268 33.2
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 4.8e-24 115.9 286 33.6
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 4.8e-24 115.9 134 44.8
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 1.8e-23 114.0 162 41.4
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 1.8e-23 114.0 162 41.4
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 3.1e-23 113.2 152 39.5
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 2.6e-22 110.2 144 42.4
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 2.9e-21 106.7 278 34.2
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 1.1e-20 104.8 145 39.3
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 1.1e-20 104.8 152 38.8
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 1.9e-20 104.0 112 49.1
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 3.2e-20 103.2 181 40.9
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 7.1e-20 102.1 72 70.8
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 2.7e-19 100.1 120 40.0
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 4.6e-19 99.4 135 44.4
Psat5g081120 Pisum sativum HOM05D000139 ORTHO05D010351 6.0e-19 99.0 81 60.5
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 1.8e-18 97.4 147 42.2
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 1.1e-17 94.7 157 34.4
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 1.5e-17 94.4 141 39.7
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 3.7e-16 89.7 74 59.5
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 4.8e-16 89.4 109 48.6
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.4e-15 87.8 141 35.5
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.3e-15 85.9 299 26.1
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 5.3e-15 85.9 97 53.6
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 2.0e-14 84.0 157 38.9
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.8e-14 82.4 147 34.0
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 2.9e-13 80.1 280 31.4
LjContig00141g0009256 Lotus japonicus HOM05D000139 ORTHO05D010351 5.0e-13 79.3 119 43.7
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 6.5e-13 79.0 73 50.7
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 7.1e-12 75.5 117 39.3
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 2.7e-11 73.6 192 34.4
Medtr4g023660 Medicago truncatula HOM05D052468 ORTHO05D261912 1.8e-10 70.9 52 69.2
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 3.9e-10 69.7 100 39.0
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.1e-09 68.2 49 65.3
Medtr4g023700 Medicago truncatula HOM05D052468 ORTHO05D264018 4.3e-09 66.2 52 65.4
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 7.4e-09 65.5 53 52.8
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 1.6e-08 64.3 77 45.5
arahy.Tifrunner.gnm1.ann1.ZNXS72 Arachis hypogaea HOM05D028262 ORTHO05D085152 1.8e-07 60.8 153 30.7
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.1e-07 60.1 86 40.7
Glyma.14G199300 Glycine max HOM05D000139 ORTHO05D029709 3.1e-07 60.1 51 54.9
arahy.Tifrunner.gnm1.ann1.9MX0BI Arachis hypogaea HOM05D028262 ORTHO05D085252 1.2e-06 58.2 165 31.5
Lalb_Chr02g0160091 Lupinus albus HOM05D000139 ORTHO05D020776 1.5e-06 57.8 67 46.3


User provided reference genes

Program Settings