Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-147 525.4 268 100.0
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 1.7e-98 363.2 262 76.0
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 4.5e-59 232.3 232 58.2
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-58 228.8 246 56.5
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 1.1e-57 227.6 199 61.8
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 7.2e-57 224.9 207 57.0
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 1.2e-56 224.2 204 60.3
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 6.1e-56 221.9 263 52.9
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 6.1e-56 221.9 198 60.1
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 1.8e-55 220.3 201 62.2
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 3.9e-55 219.2 202 60.4
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 6.7e-55 218.4 208 57.2
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 2.0e-54 216.9 195 59.5
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 2.5e-54 216.5 171 67.3
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-54 215.7 174 66.1
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 9.7e-54 214.5 211 56.9
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 4.8e-53 212.2 237 51.1
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 3.1e-52 209.5 221 54.8
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 5.3e-52 208.8 215 57.7
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 6.9e-52 208.4 187 61.0
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 2.0e-51 206.8 188 60.6
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 2.6e-51 206.5 224 52.2
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.7e-50 203.8 246 48.0
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 1.7e-50 203.8 197 58.9
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 3.8e-50 202.6 199 57.8
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 5.0e-50 202.2 204 53.9
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-50 202.2 202 55.0
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-50 202.2 207 55.1
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 1.1e-49 201.1 168 65.5
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 3.2e-49 199.5 186 60.8
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 5.5e-49 198.7 181 58.6
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 1.2e-48 197.6 158 68.4
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.1e-48 196.8 253 49.8
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 6.1e-48 195.3 242 50.4
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 7.9e-48 194.9 198 54.0
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-47 194.1 203 53.2
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.1e-47 192.2 182 59.3
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 1.5e-46 190.7 201 54.7
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.0e-46 190.3 211 50.7
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 2.6e-46 189.9 202 55.0
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 3.3e-46 189.5 234 47.9
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 3.3e-46 189.5 197 54.8
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.4e-46 189.1 200 54.0
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 8.2e-45 184.9 187 52.9
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.1e-44 184.5 197 53.8
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.1e-44 183.0 226 48.7
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.3e-44 182.2 211 53.1
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 9.1e-44 181.4 211 52.6
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 4.5e-43 179.1 248 48.4
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 6.5e-42 175.3 207 50.7
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.4e-41 174.1 153 62.1
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 2.5e-41 173.3 165 58.2
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.2e-41 172.9 203 49.3
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 2.1e-40 170.2 201 49.3
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 3.0e-39 166.4 267 40.4
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.2e-39 165.6 172 55.8
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 3.3e-38 162.9 179 52.0
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.4e-38 162.5 165 52.1
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 9.7e-38 161.4 196 50.0
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 4.8e-37 159.1 184 48.9
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 6.3e-37 158.7 170 54.1
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 1.4e-36 157.5 209 45.9
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 7.0e-36 155.2 197 47.2
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 9.1e-36 154.8 156 55.1
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 1.0e-34 151.4 141 59.6
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 2.9e-34 149.8 248 41.9
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 1.5e-30 137.5 128 55.5
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 4.4e-30 136.0 154 46.8
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 4.4e-30 136.0 154 46.8
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 5.7e-30 135.6 192 43.2
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 9.7e-30 134.8 128 54.7
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 4.8e-29 132.5 184 47.8
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 2.4e-28 130.2 213 39.4
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 2.7e-27 126.7 176 43.2
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 7.7e-27 125.2 211 39.3
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 1.7e-26 124.0 160 43.8
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 1.1e-25 121.3 176 46.6
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 1.9e-25 120.6 176 46.0
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 4.2e-25 119.4 153 46.4
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 4.2e-25 119.4 145 49.0
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 1.6e-24 117.5 136 52.9
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 3.6e-24 116.3 203 39.9
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 3.6e-24 116.3 139 44.6
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 8.0e-24 115.2 189 42.3
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 1.0e-23 114.8 199 42.2
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 2.6e-22 110.2 214 35.5
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 4.4e-22 109.4 154 44.2
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 3.7e-21 106.3 178 35.4
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 3.7e-21 106.3 249 29.7
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 6.3e-21 105.5 141 46.8
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.8e-20 104.0 209 38.8
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 5.4e-20 102.4 164 37.8
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 9.1e-20 101.7 122 47.5
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 4.5e-19 99.4 108 58.3
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.9e-19 99.0 232 36.6
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.7e-18 97.4 208 36.1
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 2.9e-18 96.7 235 34.0
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 2.9e-18 96.7 133 42.1
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.8e-18 96.3 104 58.7
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 6.6e-18 95.5 91 56.0
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 2.5e-17 93.6 222 32.9
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 2.8e-16 90.1 156 37.8
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.8e-15 87.4 100 57.0
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 1.3e-13 81.3 100 51.0
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 3.7e-13 79.7 119 44.5
arahy.Tifrunner.gnm1.ann1.ZNXS72 Arachis hypogaea HOM05D028262 ORTHO05D085152 2.4e-12 77.0 201 29.9
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 3.2e-12 76.6 83 48.2
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 1.2e-11 74.7 73 50.7
arahy.Tifrunner.gnm1.ann1.9MX0BI Arachis hypogaea HOM05D028262 ORTHO05D085252 5.0e-10 69.3 208 27.4
Glyma.14G199300 Glycine max HOM05D000139 ORTHO05D029709 1.1e-09 68.2 72 51.4
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 1.5e-09 67.8 62 58.1
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.5e-09 67.8 51 62.7
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.9e-09 67.4 73 46.6
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.3e-09 66.2 150 34.7
Medtr5g073850 Medicago truncatula HOM05D000081 ORTHO05D014784 7.3e-09 65.5 147 34.7
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 1.2e-08 64.7 80 48.8
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 2.1e-08 63.9 45 62.2
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 4.0e-07 59.7 102 37.3
arahy.Tifrunner.gnm1.ann1.WU1DK0 Arachis hypogaea HOM05D028262 ORTHO05D087405 1.2e-06 58.2 205 26.8
Lalb_Chr02g0160091 Lupinus albus HOM05D000139 ORTHO05D020776 4.4e-06 56.2 67 44.8


User provided reference genes

Program Settings