Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g070810 Medicago truncatula HOM05D007688 ORTHO05D004526 2.4e-65 251.9 117 100.0
Medtr0599s0020 Medicago truncatula HOM05D007688 ORTHO05D004526 6.8e-36 154.1 107 68.2
Medtr3g034840 Medicago truncatula HOM05D007688 ORTHO05D004526 6.8e-36 154.1 107 68.2
Medtr3g087440 Medicago truncatula HOM05D007688 ORTHO05D004526 2.6e-35 152.1 108 67.6
Medtr3g077875 Medicago truncatula HOM05D007688 ORTHO05D004526 4.1e-33 144.8 107 65.4
Medtr5g006100 Medicago truncatula HOM05D003216 ORTHO05D004526 7.8e-32 140.6 107 63.6
Medtr7g065910 Medicago truncatula HOM05D000593 ORTHO05D004526 6.1e-29 131.0 114 59.6
Medtr5g079560 Medicago truncatula HOM05D007688 ORTHO05D004526 8.0e-29 130.6 94 66.0
Medtr7g064870 Medicago truncatula HOM05D007688 ORTHO05D004526 8.0e-29 130.6 108 63.0
Medtr1g080040 Medicago truncatula HOM05D000593 ORTHO05D004526 3.0e-28 128.6 81 70.4
Medtr5g046160 Medicago truncatula HOM05D000593 ORTHO05D004526 4.9e-26 121.3 89 67.4
Medtr7g034570 Medicago truncatula HOM05D007688 ORTHO05D004526 1.2e-24 116.7 84 65.5
Medtr7g010970 Medicago truncatula HOM05D000593 ORTHO05D004526 1.9e-22 109.4 79 62.0
Medtr0156s0040 Medicago truncatula HOM05D000593 ORTHO05D004526 1.1e-17 93.6 80 58.8
Medtr5g031650 Medicago truncatula HOM05D007688 ORTHO05D004526 3.2e-17 92.0 99 46.5
Medtr4g119600 Medicago truncatula HOM05D007688 ORTHO05D004526 1.2e-16 90.1 99 45.5
Medtr8g107490 Medicago truncatula HOM05D000593 ORTHO05D004526 1.2e-16 90.1 109 43.1
Medtr3g067290 Medicago truncatula HOM05D007688 ORTHO05D004526 1.6e-16 89.7 99 44.4
Medtr3g015530 Medicago truncatula HOM05D007688 ORTHO05D004526 2.7e-16 89.0 116 44.8
Medtr6g075990 Medicago truncatula HOM05D007688 ORTHO05D004526 1.0e-15 87.0 99 45.5
Medtr8g009330 Medicago truncatula HOM05D007688 ORTHO05D004526 2.3e-15 85.9 99 43.4
Medtr4g120790 Medicago truncatula HOM05D000593 ORTHO05D004526 3.9e-15 85.1 57 64.9
Medtr8g038805 Medicago truncatula HOM05D007688 ORTHO05D004526 1.5e-14 83.2 75 52.0
Medtr5g015710 Medicago truncatula HOM05D007688 ORTHO05D004526 4.3e-14 81.6 72 59.7
Medtr6g464570 Medicago truncatula HOM05D000593 ORTHO05D004526 4.3e-14 81.6 103 43.7
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 7.3e-14 80.9 106 43.4
Medtr6g090600 Medicago truncatula HOM05D007688 ORTHO05D004526 7.3e-14 80.9 104 42.3
Medtr1g043440 Medicago truncatula HOM05D000593 ORTHO05D004526 9.5e-14 80.5 45 71.1
Medtr4g057975 Medicago truncatula HOM05D007688 ORTHO05D004526 2.1e-13 79.3 99 40.4
Medtr1g075860 Medicago truncatula HOM05D007688 ORTHO05D004526 3.1e-12 75.5 55 70.9
Medtr4g051638 Medicago truncatula HOM05D007688 ORTHO05D004526 4.0e-12 75.1 110 42.7
Ca_26592_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.2e-11 73.6 81 45.7
Ca_04248_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.5e-11 73.2 81 45.7
Medtr2g067930 Medicago truncatula HOM05D007688 ORTHO05D004526 2.0e-11 72.8 97 42.3
Ca_23077_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.6e-11 72.4 98 40.8
Ca_19793_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.4e-11 72.0 81 45.7
Medtr2g027000 Medicago truncatula HOM05D007688 ORTHO05D004526 3.4e-11 72.0 38 76.3
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-10 70.1 74 51.4
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 1.3e-10 70.1 118 35.6
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.7e-10 69.7 81 44.4
Ca_14191_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.7e-10 69.7 85 42.4
Medtr7g050385 Medicago truncatula HOM05D007688 ORTHO05D004526 1.7e-10 69.7 109 41.3
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.7e-10 69.7 122 34.4
TWI36G0859 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.7e-10 69.7 105 35.2
Medtr1g012760 Medicago truncatula HOM05D000593 ORTHO05D004526 2.9e-10 68.9 100 38.0
Medtr3g030230 Medicago truncatula HOM05D007688 ORTHO05D004526 2.9e-10 68.9 90 42.2
Medtr4g100470 Medicago truncatula HOM05D000593 ORTHO05D004526 4.9e-10 68.2 38 71.1
TWI59G0356 Tripterygium wilfordii HOM05D000593 ORTHO05D004526 4.9e-10 68.2 101 33.7
Medtr1g059880 Medicago truncatula HOM05D007688 ORTHO05D004526 6.4e-10 67.8 93 41.9
TWI15G1013 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-10 67.8 96 39.6
Ca_04412_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 8.3e-10 67.4 85 41.2
Medtr3g462670 Medicago truncatula HOM05D007688 ORTHO05D004526 8.3e-10 67.4 92 40.2
Medtr8g103800 Medicago truncatula HOM05D000593 ORTHO05D004526 8.3e-10 67.4 77 40.3
TWI31G1191 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-09 67.0 97 34.0
Gorai.004G152900 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.9e-09 66.2 100 36.0
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 2.4e-09 65.9 100 36.0
Ca_22767_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.4e-09 65.9 85 41.2
Medtr2g046540 Medicago truncatula HOM05D007688 ORTHO05D004526 2.4e-09 65.9 43 81.4
Medtr4g057300 Medicago truncatula HOM05D000593 ORTHO05D004526 2.4e-09 65.9 75 45.3
VMungo0331G0649 Vigna mungo HOM05D000593 ORTHO05D004526 3.2e-09 65.5 119 32.8
Gorai.007G053200 Gossypium raimondii HOM05D000593 ORTHO05D000562 4.1e-09 65.1 83 39.8
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 4.1e-09 65.1 121 35.5
TWI81G1065 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.1e-09 65.1 111 32.4
TWI56G0970 Tripterygium wilfordii HOM05D000593 ORTHO05D004526 7.1e-09 64.3 100 37.0
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-09 64.3 100 37.0
Atru.chr2.270 Acer truncatum HOM05D000593 ORTHO05D000562 9.2e-09 63.9 83 36.1
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 9.2e-09 63.9 105 35.2
Medtr4g066090 Medicago truncatula HOM05D007688 ORTHO05D004526 9.2e-09 63.9 44 59.1
TWI53G0239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.2e-09 63.9 105 32.4
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 1.2e-08 63.5 64 43.8
Ca_07560_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.6e-08 63.2 76 42.1
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 1.6e-08 63.2 98 35.7
Medtr3g045850 Medicago truncatula HOM05D007688 ORTHO05D004526 2.1e-08 62.8 49 65.3
Medtr3g467720 Medicago truncatula HOM05D007688 ORTHO05D004526 2.1e-08 62.8 78 41.0
TWI34G1957 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-08 62.8 100 35.0
Medtr6g089230 Medicago truncatula HOM05D003216 ORTHO05D004526 6.0e-08 61.2 75 42.7
Medtr8g446840 Medicago truncatula HOM05D007688 ORTHO05D004526 6.0e-08 61.2 36 66.7
Medtr8g016360 Medicago truncatula HOM05D007688 ORTHO05D030194 7.8e-08 60.8 96 38.5
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.0e-07 60.5 96 34.4
Medtr1g075420 Medicago truncatula HOM05D007688 ORTHO05D004526 1.0e-07 60.5 49 63.3
TWI79G1376 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-07 60.5 106 33.0
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.3e-07 60.1 115 31.3
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 1.3e-07 60.1 93 39.8
Atru.chr6.964 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-07 59.3 106 34.9
Medtr7g060350 Medicago truncatula HOM05D007688 ORTHO05D004526 2.3e-07 59.3 57 42.1
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 3.0e-07 58.9 98 34.7
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 3.0e-07 58.9 102 32.4
Medtr1g098990 Medicago truncatula HOM05D007688 ORTHO05D004526 3.0e-07 58.9 45 53.3
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 3.0e-07 58.9 118 31.4
Atru.chr7.1229 Acer truncatum HOM05D000593 ORTHO05D000562 5.1e-07 58.2 100 33.0
Medtr1g058140 Medicago truncatula HOM05D007688 ORTHO05D004526 5.1e-07 58.2 62 46.8
Medtr8g445570 Medicago truncatula HOM05D007688 ORTHO05D004526 5.1e-07 58.2 59 45.8
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 5.1e-07 58.2 119 31.1
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 6.6e-07 57.8 104 35.6
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.6e-07 57.8 115 30.4
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.6e-07 57.8 115 30.4
Aqoxy5G03436 Aquilegia oxysepala HOM05D000593 ORTHO05D004526 6.6e-07 57.8 107 31.8
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 6.6e-07 57.8 105 34.3
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 6.6e-07 57.8 88 37.5
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 6.6e-07 57.8 34 76.5
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 6.6e-07 57.8 105 34.3
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 8.6e-07 57.4 102 36.3
Dinv16416 Davidia involucrata HOM05D000593 ORTHO05D000562 8.6e-07 57.4 93 35.5
Aqoxy7G01762 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.1e-06 57.0 63 41.3
Gorai.008G062800 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.1e-06 57.0 100 33.0
Atru.chr2.2322 Acer truncatum HOM05D000593 ORTHO05D000562 1.5e-06 56.6 102 34.3
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.5e-06 56.6 85 32.9
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.5e-06 56.6 104 35.6
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-06 56.6 100 33.0
Ca_05086_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.9e-06 56.2 68 41.2
Medtr2g030640 Medicago truncatula HOM05D000593 ORTHO05D004526 1.9e-06 56.2 31 74.2
Medtr5g046245 Medicago truncatula HOM05D007688 ORTHO05D004526 1.9e-06 56.2 50 42.0
TWI14G0920 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-06 56.2 98 32.7
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.5e-06 55.8 104 34.6
CSS0002063 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.5e-06 55.8 112 32.1
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 2.5e-06 55.8 108 33.3
Medtr8g037210 Medicago truncatula HOM05D000593 ORTHO05D004526 2.5e-06 55.8 31 77.4
TWI14G0929 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-06 55.8 111 27.0
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 3.3e-06 55.5 104 34.6
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 3.3e-06 55.5 89 39.3
Atru.chr3.3235 Acer truncatum HOM05D000593 ORTHO05D000562 4.3e-06 55.1 77 39.0
FvH4_6g12552 Fragaria vesca HOM05D000593 ORTHO05D000562 4.3e-06 55.1 101 32.7
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.6e-06 54.7 127 33.1
Medtr2g461140 Medicago truncatula HOM05D000593 ORTHO05D004526 5.6e-06 54.7 104 33.7
Medtr4g049670 Medicago truncatula HOM05D007688 ORTHO05D004526 5.6e-06 54.7 81 39.5
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 5.6e-06 54.7 113 33.6
TWI63G1156 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.6e-06 54.7 73 38.4
Hma1.2p1_0627F.1_g191730 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 7.3e-06 54.3 90 35.6
TWI79G0388 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.5e-06 53.9 96 34.4


User provided reference genes

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