Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g067480 Medicago truncatula HOM05D001219 ORTHO05D001017 7.3e-114 414.1 234 100.0
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 2.8e-25 119.8 106 57.5
TPR.G26088 Trifolium pratense HOM05D000474 ORTHO05D003648 2.7e-23 113.2 90 62.2
Medtr6g016905 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-22 110.9 112 57.1
Medtr3g110740 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-22 110.2 101 54.5
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 4.2e-21 105.9 106 50.0
TPR.G9692 Trifolium pratense HOM05D001219 ORTHO05D001017 9.4e-21 104.8 101 56.4
Medtr4g059340 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-20 104.4 106 52.8
Medtr3g110148 Medicago truncatula HOM05D001219 ORTHO05D001017 2.1e-20 103.6 121 48.8
TPR.G9668 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-20 103.6 102 53.9
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 3.0e-19 99.8 93 54.8
TPR.G9690 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-19 99.4 158 42.4
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-19 99.4 106 50.9
Medtr6g016705 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-19 98.6 101 55.4
Medtr3g036270 Medicago truncatula HOM05D001219 ORTHO05D001017 8.8e-19 98.2 101 53.5
Medtr5g046730 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-18 97.4 101 49.5
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-18 97.4 102 51.0
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-18 97.1 121 44.6
TPR.G38777 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-18 96.3 107 48.6
Medtr4g006290 Medicago truncatula HOM05D001219 ORTHO05D001017 4.4e-18 95.9 94 54.3
TPR.G38764 Trifolium pratense HOM05D001219 ORTHO05D001017 4.4e-18 95.9 108 52.8
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-17 94.4 108 48.1
Medtr6g022820 Medicago truncatula HOM05D001219 ORTHO05D001017 2.8e-17 93.2 97 52.6
Medtr6g016760 Medicago truncatula HOM05D001219 ORTHO05D001017 3.7e-17 92.8 98 52.0
TPR.G38803 Trifolium pratense HOM05D001219 ORTHO05D001017 3.7e-17 92.8 97 50.5
Medtr6g042905 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-16 90.9 97 51.5
Medtr6g016725 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-16 90.5 101 48.5
Medtr6g016750 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-16 90.5 88 52.3
Medtr6g016720 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-16 90.1 107 48.6
TPR.G29908 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-16 89.7 97 51.5
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 4.1e-16 89.4 130 43.8
Ca_20557_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 5.4e-16 89.0 104 48.1
Ca_30909_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 5.4e-16 89.0 104 48.1
Medtr4g024200 Medicago truncatula HOM05D001219 ORTHO05D001017 7.0e-16 88.6 102 45.1
Psat3g012240 Pisum sativum HOM05D001219 ORTHO05D001017 1.2e-15 87.8 92 53.3
TPR.G15724 Trifolium pratense HOM05D001219 ORTHO05D001017 2.0e-15 87.0 130 39.2
Psat0s1674g0080 Pisum sativum HOM05D001219 ORTHO05D001017 4.5e-15 85.9 92 52.2
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 4.5e-15 85.9 95 48.4
TPR.G29931 Trifolium pratense HOM05D001219 ORTHO05D001017 4.5e-15 85.9 121 43.8
Medtr4g005810 Medicago truncatula HOM05D001219 ORTHO05D001017 5.9e-15 85.5 89 52.8
TPR.G15726 Trifolium pratense HOM05D001219 ORTHO05D001017 5.9e-15 85.5 100 45.0
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 7.7e-15 85.1 95 48.4
Medtr6g016685 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-14 84.3 77 54.5
Psat5g104160 Pisum sativum HOM05D001219 ORTHO05D001017 2.3e-14 83.6 98 44.9
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-14 83.2 88 50.0
Medtr4g133640 Medicago truncatula HOM05D001219 ORTHO05D001017 5.0e-14 82.4 99 50.5
Psat7g261560 Pisum sativum HOM05D001219 ORTHO05D001017 5.0e-14 82.4 106 45.3
Psat7g261760 Pisum sativum HOM05D001219 ORTHO05D001017 5.0e-14 82.4 106 45.3
Medtr4g006210 Medicago truncatula HOM05D001219 ORTHO05D001017 6.5e-14 82.0 98 52.0
TPR.G9967 Trifolium pratense HOM05D001219 ORTHO05D001017 6.5e-14 82.0 98 46.9
TPR.G15180 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-13 80.9 121 45.5
Medtr2g007590 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-13 80.1 99 50.5
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-13 80.1 105 44.8
Medtr8g446780 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-13 80.1 119 42.0
Medtr4g021765 Medicago truncatula HOM05D001219 ORTHO05D001017 4.2e-13 79.3 84 51.2
Medtr6g016910 Medicago truncatula HOM05D001219 ORTHO05D001017 4.2e-13 79.3 98 51.0
Psat7g261720 Pisum sativum HOM05D001219 ORTHO05D001017 4.2e-13 79.3 100 45.0
Psat3g055240 Pisum sativum HOM05D001219 ORTHO05D001017 5.5e-13 79.0 99 44.4
Psat3g054360 Pisum sativum HOM05D001219 ORTHO05D001017 7.2e-13 78.6 95 44.2
Psat0s538g0040 Pisum sativum HOM05D001219 ORTHO05D001017 9.5e-13 78.2 102 49.0
Psat3g051760 Pisum sativum HOM05D001219 ORTHO05D001017 1.2e-12 77.8 93 46.2
Medtr4g006450 Medicago truncatula HOM05D001219 ORTHO05D001017 2.1e-12 77.0 70 54.3
Psat7g258720 Pisum sativum HOM05D001219 ORTHO05D001017 2.1e-12 77.0 104 45.2
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 3.6e-12 76.3 94 52.1
TPR.G15706 Trifolium pratense HOM05D001219 ORTHO05D001017 4.7e-12 75.9 76 51.3
Medtr6g016740 Medicago truncatula HOM05D001219 ORTHO05D001017 6.1e-12 75.5 77 51.9
Psat3g014520 Pisum sativum HOM05D001219 ORTHO05D001017 6.1e-12 75.5 92 50.0
Medtr5g075860 Medicago truncatula HOM05D001219 ORTHO05D001017 8.0e-12 75.1 98 49.0
TPR.G19224 Trifolium pratense HOM05D001219 ORTHO05D001017 1.8e-11 73.9 106 43.4
Medtr2g078550 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-11 73.6 96 46.9
Medtr1g075040 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-10 70.9 79 51.9
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 2.0e-10 70.5 98 42.9
TPR.G38812 Trifolium pratense HOM05D001219 ORTHO05D001017 2.6e-10 70.1 110 40.0
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-10 69.7 82 47.6
Glyma.07G026100 Glycine max HOM05D001219 ORTHO05D001017 4.4e-10 69.3 73 50.7
Medtr0295s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 7.5e-10 68.6 83 53.0
TPR.G15687 Trifolium pratense HOM05D001219 ORTHO05D001017 7.5e-10 68.6 95 45.3
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.3e-09 67.8 80 51.2
Ca_07189_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.3e-09 67.8 80 51.2
Psat3g054200 Pisum sativum HOM05D001219 ORTHO05D001017 1.3e-09 67.8 93 41.9
TPR.G22462 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-09 67.4 89 46.1
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 2.2e-09 67.0 82 48.8
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 2.2e-09 67.0 83 44.6
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 3.7e-09 66.2 94 43.6
Medtr6g016915 Medicago truncatula HOM05D001219 ORTHO05D001017 3.7e-09 66.2 97 39.2
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.9e-09 65.9 103 35.9
TPR.G37434 Trifolium pratense HOM05D001219 ORTHO05D001017 6.3e-09 65.5 88 39.8
Lalb_Chr18g0057661 Lupinus albus HOM05D001219 ORTHO05D001017 8.3e-09 65.1 71 50.7
Medtr1g115380 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-09 65.1 99 41.4
Medtr4g435338 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-09 65.1 95 40.0
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 8.3e-09 65.1 73 47.9
Medtr1g028400 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-08 64.7 59 57.6
TPR.G29730 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-08 64.7 103 40.8
Medtr4g008430 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-08 64.3 80 46.2
Medtr4g008450 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-08 64.3 94 39.4
Psat7g261480 Pisum sativum HOM05D001219 ORTHO05D001017 1.4e-08 64.3 98 41.8
Psat7g041280 Pisum sativum HOM05D001219 ORTHO05D001017 2.4e-08 63.5 98 41.8
Medtr4g031590 Medicago truncatula HOM05D039518 ORTHO05D257331 3.1e-08 63.2 35 91.4
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 3.1e-08 63.2 98 34.7
Medtr4g024220 Medicago truncatula HOM05D001219 ORTHO05D001017 5.4e-08 62.4 76 46.1
Medtr5g043370 Medicago truncatula HOM05D039518 ORTHO05D266200 5.4e-08 62.4 35 88.6
Medtr8g045150 Medicago truncatula HOM05D001219 ORTHO05D001017 5.4e-08 62.4 128 36.7
Lj3g0020556 Lotus japonicus HOM05D001219 ORTHO05D001017 1.2e-07 61.2 102 40.2
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-07 61.2 79 48.1
Ca_30910_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.6e-07 60.8 96 36.5
Medtr1g023530 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-07 60.8 123 39.0
TPR.G15685 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-07 60.8 104 39.4
Medtr1g069145 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-07 60.5 84 42.9
Medtr1g115390 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-07 60.5 101 38.6
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 2.7e-07 60.1 98 34.7
Medtr5g430490 Medicago truncatula HOM05D001219 ORTHO05D001017 2.7e-07 60.1 98 37.8
TPR.G29727 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-07 60.1 82 45.1
Medtr8g045170 Medicago truncatula HOM05D001219 ORTHO05D001017 5.9e-07 58.9 63 49.2
TPR.G29721 Trifolium pratense HOM05D001219 ORTHO05D001017 5.9e-07 58.9 104 38.5
Medtr3g074570 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-07 58.5 79 45.6
Hma1.2p1_0135F.1_g061780 Hydrangea macrophylla HOM05D001219 ORTHO05D001017 1.0e-06 58.2 88 33.0
Medtr4g008420 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-06 58.2 163 30.7
Medtr7g029070 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-06 58.2 50 54.0
FAN05G1445 Fragaria x ananassa HOM05D001219 ORTHO05D001017 1.3e-06 57.8 172 28.5
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 1.7e-06 57.4 84 38.1
Psat7g261520 Pisum sativum HOM05D001219 ORTHO05D001017 1.7e-06 57.4 98 39.8
Dinv23311 Davidia involucrata HOM05D001219 ORTHO05D001017 2.3e-06 57.0 89 36.0
FAN02G1796 Fragaria x ananassa HOM05D001219 ORTHO05D001017 2.3e-06 57.0 172 27.9
Rhsim06G0134500 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.3e-06 57.0 82 41.5
FAN05G4962 Fragaria x ananassa HOM05D001219 ORTHO05D001017 2.9e-06 56.6 172 26.7
Lsat_1_v5_gn_4_86000 Lactuca sativa HOM05D001219 ORTHO05D001017 2.9e-06 56.6 95 37.9
FAN09G4190 Fragaria x ananassa HOM05D001219 ORTHO05D001017 3.8e-06 56.2 158 28.5
Lalb_Chr25g0279211 Lupinus albus HOM05D001219 ORTHO05D001017 3.8e-06 56.2 72 50.0
Medtr8g095050 Medicago truncatula HOM05D039518 ORTHO05D266423 3.8e-06 56.2 35 82.9
TPR.G6402 Trifolium pratense HOM05D001219 ORTHO05D001017 3.8e-06 56.2 70 47.1
arahy.Tifrunner.gnm1.ann1.NR23UA Arachis hypogaea HOM05D001219 ORTHO05D001017 5.0e-06 55.8 76 38.2
arahy.Tifrunner.gnm1.ann1.VNVE4D Arachis hypogaea HOM05D001219 ORTHO05D001017 5.0e-06 55.8 76 38.2
RhsimUnG0243700 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.0e-06 55.8 91 38.5
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 6.6e-06 55.5 96 38.5
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 6.6e-06 55.5 96 38.5
Ciclev10027319m.g Citrus clementina HOM05D001219 ORTHO05D001017 6.6e-06 55.5 89 34.8
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 6.6e-06 55.5 74 40.5
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 6.6e-06 55.5 98 36.7
Medtr3g083280 Medicago truncatula HOM05D001219 ORTHO05D001017 8.6e-06 55.1 81 38.3
Medtr3g092350 Medicago truncatula HOM05D000021 ORTHO05D000010 8.6e-06 55.1 37 75.7
Medtr4g009055 Medicago truncatula HOM05D001219 ORTHO05D001017 8.6e-06 55.1 79 41.8
Medtr7g044870 Medicago truncatula HOM05D001219 ORTHO05D001017 8.6e-06 55.1 101 36.6


User provided reference genes

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