Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g066890 Medicago truncatula HOM05D003087 ORTHO05D003312 5.7e-43 177.2 89 100.0
Medtr7g029260 Medicago truncatula HOM05D003087 ORTHO05D003312 4.8e-18 94.4 88 59.1
Atru.chr2.3270 Acer truncatum HOM05D003087 ORTHO05D003312 4.0e-12 74.7 86 45.3
Actinidia05111 Actinidia chinensis HOM05D003087 ORTHO05D003312 8.9e-12 73.6 85 48.2
AL3G50190 Arabidopsis lyrata HOM05D003087 ORTHO05D003312 5.7e-11 70.9 85 41.2
Duzib268G1323 Durio zibethinus HOM05D003087 ORTHO05D003312 5.7e-11 70.9 86 43.0
Eucgr.L03287 Eucalyptus grandis HOM05D003087 ORTHO05D003312 1.7e-10 69.3 87 42.5
Rhsim06G0214600 Rhododendron simsii HOM05D003087 ORTHO05D003312 2.2e-10 68.9 87 47.1
Thhalv10027438m.g Eutrema salsugineum HOM05D003087 ORTHO05D003312 3.7e-10 68.2 84 40.5
Sp7g31920 Schrenkiella parvula HOM05D003087 ORTHO05D003312 3.7e-10 68.2 84 41.7
AT2G17305 Arabidopsis thaliana HOM05D003087 ORTHO05D003312 4.9e-10 67.8 85 41.2
QL08p011993 Quercus lobata HOM05D003087 ORTHO05D003312 1.1e-09 66.6 89 42.7
MD11G1223200 Malus domestica HOM05D003087 ORTHO05D003312 1.8e-09 65.9 87 39.1
Carub.0003s2703 Capsella rubella HOM05D003087 ORTHO05D003312 2.4e-09 65.5 84 36.9
QL08p012174 Quercus lobata HOM05D003087 ORTHO05D003312 2.4e-09 65.5 89 41.6
Medtr5g080090 Medicago truncatula HOM05D003087 ORTHO05D003312 3.1e-09 65.1 74 45.9
A03p62650 Brassica napus HOM05D003087 ORTHO05D003312 4.1e-09 64.7 84 40.5
Glyma.02G289100 Glycine max HOM05D003087 ORTHO05D003312 5.4e-09 64.3 90 43.3
MD03G1208600 Malus domestica HOM05D003087 ORTHO05D003312 5.4e-09 64.3 87 39.1
BraA03t15334Z Brassica rapa HOM05D003087 ORTHO05D003312 7.0e-09 63.9 84 40.5
BcaNung03364 Brassica carinata HOM05D003087 ORTHO05D003312 9.2e-09 63.5 84 39.3
C07p60200 Brassica napus HOM05D003087 ORTHO05D003312 9.2e-09 63.5 84 39.3
BolC7t46461H Brassica oleracea HOM05D003087 ORTHO05D003312 9.2e-09 63.5 84 39.3
CANSAT78G0127 Cannabis sativa HOM05D003087 ORTHO05D003312 1.2e-08 63.2 81 42.0
LjContig00272g0016451 Lotus japonicus HOM05D003087 ORTHO05D003312 1.2e-08 63.2 82 42.7
QL08p012142 Quercus lobata HOM05D003087 ORTHO05D003312 1.2e-08 63.2 87 40.2
Atru.chr2.3271 Acer truncatum HOM05D003087 ORTHO05D003312 1.6e-08 62.8 87 39.1
CSS0040473 Camellia sinensis var. sinensis HOM05D003087 ORTHO05D003312 1.6e-08 62.8 86 41.9
Manes.03G091200 Manihot esculenta HOM05D003087 ORTHO05D003312 1.6e-08 62.8 86 37.2
TWI38G0929 Tripterygium wilfordii HOM05D003087 ORTHO05D003312 1.6e-08 62.8 94 38.3
TAR629G2777 Trochodendron aralioides HOM05D003087 ORTHO05D003312 1.6e-08 62.8 85 43.5
Medtr5g080120 Medicago truncatula HOM05D003087 ORTHO05D003312 3.5e-08 61.6 43 67.4
Hma1.2p1_1271F.1_g271870 Hydrangea macrophylla HOM05D003087 ORTHO05D003312 5.9e-08 60.8 94 38.3
Manes.03G127400 Manihot esculenta HOM05D003087 ORTHO05D003312 5.9e-08 60.8 89 43.8
Atru.chr2.3272 Acer truncatum HOM05D003087 ORTHO05D003312 7.8e-08 60.5 87 36.8
Glyma.14G025750 Glycine max HOM05D003087 ORTHO05D003312 7.8e-08 60.5 86 39.5
Sabra11G0122300 Salix brachista HOM05D003087 ORTHO05D003312 7.8e-08 60.5 87 42.5
AL5G44970 Arabidopsis lyrata HOM05D003087 ORTHO05D003312 1.3e-07 59.7 80 37.5
Carub.0003s3127 Capsella rubella HOM05D003087 ORTHO05D003312 1.3e-07 59.7 85 40.0
CiPaw.11G186600 Carya illinoinensis HOM05D003087 ORTHO05D003312 1.3e-07 59.7 85 41.2
Lj5g0027658 Lotus japonicus HOM05D003087 ORTHO05D003312 1.7e-07 59.3 89 40.4
Lj6g0025252 Lotus japonicus HOM05D003087 ORTHO05D003312 1.7e-07 59.3 85 41.2
Prupe.4G208300 Prunus persica HOM05D003087 ORTHO05D003312 1.7e-07 59.3 92 41.3
CARHR117950 Cardamine hirsuta HOM05D003087 ORTHO05D003312 2.3e-07 58.9 84 38.1
BcaNung03799 Brassica carinata HOM05D003087 ORTHO05D003312 3.9e-07 58.2 86 34.9
C01p04660 Brassica napus HOM05D003087 ORTHO05D003312 3.9e-07 58.2 86 34.9
BolC1t00449H Brassica oleracea HOM05D003087 ORTHO05D003312 3.9e-07 58.2 86 34.9
Carub.0004s0398 Capsella rubella HOM05D003087 ORTHO05D003312 5.0e-07 57.8 81 32.1
Manes.03G091400 Manihot esculenta HOM05D003087 ORTHO05D003312 5.0e-07 57.8 86 36.0
Sp6g16770 Schrenkiella parvula HOM05D003087 ORTHO05D003312 5.0e-07 57.8 82 39.0
Medtr1g090907 Medicago truncatula HOM05D003087 ORTHO05D003312 6.6e-07 57.4 88 35.2
Potri.011G136200 Populus trichocarpa HOM05D003087 ORTHO05D003312 6.6e-07 57.4 86 41.9
Sabra16G0285500 Salix brachista HOM05D003087 ORTHO05D003312 6.6e-07 57.4 86 40.7
THA.LOC104812534 Tarenaya hassleriana HOM05D003087 ORTHO05D003312 6.6e-07 57.4 81 40.7
Lj1C869T9 Lonicera japonica HOM05D003087 ORTHO05D003312 8.6e-07 57.0 88 43.2
Prupe.4G208200 Prunus persica HOM05D003087 ORTHO05D003312 8.6e-07 57.0 84 40.5
LjContig00272g0016156 Lotus japonicus HOM05D003087 ORTHO05D003312 1.1e-06 56.6 85 37.6
Medtr5g080150 Medicago truncatula HOM05D003087 ORTHO05D003312 1.1e-06 56.6 68 45.6
Oeu020132.1 Olea europaea HOM05D003087 ORTHO05D003312 1.1e-06 56.6 87 39.1
A01p04270 Brassica napus HOM05D003087 ORTHO05D003312 1.5e-06 56.2 86 34.9
BraA01t00416Z Brassica rapa HOM05D003087 ORTHO05D003312 1.5e-06 56.2 86 34.9
Cpa.g.sc97.41 Carica papaya HOM05D003087 ORTHO05D003312 1.5e-06 56.2 88 36.4
Sp4g03660 Schrenkiella parvula HOM05D003087 ORTHO05D003312 1.5e-06 56.2 84 35.7
BcaC02g10284 Brassica carinata HOM05D003087 ORTHO05D003312 1.9e-06 55.8 87 35.6
C04p30780 Brassica napus HOM05D003087 ORTHO05D003312 1.9e-06 55.8 87 35.6
BolC4t24597H Brassica oleracea HOM05D003087 ORTHO05D003312 1.9e-06 55.8 87 35.6
Migut.M01788 Erythranthe guttata HOM05D003087 ORTHO05D003312 1.9e-06 55.8 87 37.9
Eucgr.F00967 Eucalyptus grandis HOM05D003087 ORTHO05D003312 1.9e-06 55.8 77 40.3
Manes.15G074400 Manihot esculenta HOM05D003087 ORTHO05D003312 3.3e-06 55.1 94 35.1
BcaB02g08119 Brassica carinata HOM05D003087 ORTHO05D003312 4.3e-06 54.7 87 34.5
Lj5g0022613 Lotus japonicus HOM05D003087 ORTHO05D003312 5.6e-06 54.3 87 37.9
Medtr1g090903 Medicago truncatula HOM05D003087 ORTHO05D003312 5.6e-06 54.3 88 36.4
Potri.001G420500 Populus trichocarpa HOM05D003087 ORTHO05D003312 5.6e-06 54.3 86 39.5
LjContig00272g0019978 Lotus japonicus HOM05D003087 ORTHO05D003312 7.3e-06 53.9 84 39.3
Sp4g05500 Schrenkiella parvula HOM05D003087 ORTHO05D003312 7.3e-06 53.9 84 36.9


User provided reference genes

Program Settings