Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 2.3e-82 308.9 160 100.0
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 1.1e-23 114.0 172 49.4
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 1.3e-21 107.1 175 45.7
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 5.6e-17 91.7 181 41.4
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 1.2e-14 84.0 174 43.7
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 3.4e-14 82.4 168 44.0
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 8.4e-13 77.8 150 45.3
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 1.4e-12 77.0 163 39.9
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 1.9e-12 76.6 155 38.7
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 2.5e-12 76.3 161 40.4
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 3.2e-12 75.9 170 42.9
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 4.2e-12 75.5 163 39.3
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 9.3e-12 74.3 172 43.0
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.2e-11 73.9 150 39.3
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.2e-11 73.9 169 40.2
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.7e-11 72.8 145 35.2
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.1e-11 71.6 150 38.7
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.0e-10 70.9 116 42.2
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.0e-10 70.9 116 42.2
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 2.3e-10 69.7 153 37.3
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 2.3e-10 69.7 153 39.9
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 2.3e-10 69.7 158 39.2
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 3.9e-10 68.9 163 33.1
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 6.7e-10 68.2 153 40.5
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.1e-09 67.4 155 39.4
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.5e-09 67.0 145 38.6
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 4.3e-09 65.5 149 42.3
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 7.4e-09 64.7 138 42.0
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 9.7e-09 64.3 126 42.1
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 9.7e-09 64.3 144 38.9
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 9.7e-09 64.3 98 41.8
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.3e-08 63.9 148 39.9
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.3e-08 63.9 159 33.3
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 1.6e-08 63.5 62 54.8
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.2e-08 63.2 138 31.9
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 2.8e-08 62.8 143 32.2
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 4.8e-08 62.0 153 37.9
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 4.8e-08 62.0 153 37.9
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.3e-08 61.6 139 36.0
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 6.3e-08 61.6 135 40.7
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 8.2e-08 61.2 141 41.8
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 8.2e-08 61.2 152 38.8
BcaB03g13666 Brassica carinata HOM05D010872 ORTHO05D013672 1.8e-07 60.1 138 34.1
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.8e-07 60.1 139 36.0
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 1.8e-07 60.1 154 36.4
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 2.4e-07 59.7 139 43.2
BcaC05g27742 Brassica carinata HOM05D010872 ORTHO05D013672 3.1e-07 59.3 140 34.3
C05p37280 Brassica napus HOM05D010872 ORTHO05D013672 3.1e-07 59.3 140 34.3
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.1e-07 59.3 137 34.3
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 4.1e-07 58.9 142 37.3
BolC5t32474H Brassica oleracea HOM05D010872 ORTHO05D013672 5.3e-07 58.5 140 34.3
Carub.0001s3286 Capsella rubella HOM05D010872 ORTHO05D013672 5.3e-07 58.5 82 43.9
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 5.3e-07 58.5 135 41.5
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 6.9e-07 58.2 39 64.1
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 9.0e-07 57.8 116 40.5
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.6e-06 56.2 150 36.7
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 2.6e-06 56.2 142 33.1
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 2.6e-06 56.2 141 36.2
AL1G49920 Arabidopsis lyrata HOM05D010872 ORTHO05D013672 3.4e-06 55.8 83 42.2
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.4e-06 55.8 144 34.7
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 4.5e-06 55.5 41 61.0
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 7.7e-06 54.7 28 78.6
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 7.7e-06 54.7 149 35.6
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.7e-06 54.7 59 52.5
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.7e-06 54.7 59 52.5
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.7e-06 54.7 32 68.8
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 7.7e-06 54.7 92 39.1
AT1G35210 Arabidopsis thaliana HOM05D010872 ORTHO05D013672 1.0e-05 54.3 58 46.6
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 1.0e-05 54.3 32 68.8
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.0e-05 54.3 59 52.5
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 1.0e-05 54.3 143 29.4


User provided reference genes

Program Settings