Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.3e-67 259.6 134 100.0
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.3e-67 259.6 134 100.0
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.8e-53 212.6 141 83.7
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 2.9e-51 205.3 141 80.9
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 2.4e-45 185.7 137 74.5
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 2.7e-44 182.2 140 71.4
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 3.8e-43 178.3 133 69.9
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 4.0e-40 168.3 144 66.0
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 2.9e-38 162.2 131 65.6
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 4.1e-37 158.3 143 60.8
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 2.0e-36 156.0 143 60.8
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 5.9e-36 154.5 133 63.2
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.9e-35 151.8 130 64.6
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 1.1e-34 150.2 138 59.4
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 4.3e-34 148.3 132 62.9
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 1.2e-33 146.7 142 59.2
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.6e-33 146.4 137 59.9
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.1e-33 146.0 129 62.0
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 2.1e-33 146.0 128 64.1
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 2.8e-33 145.6 129 63.6
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 2.8e-33 145.6 129 61.2
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 6.2e-33 144.4 140 57.1
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 8.0e-33 144.1 134 60.4
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.8e-32 142.9 131 62.6
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 4.0e-32 141.7 124 62.9
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 5.2e-32 141.4 133 56.4
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.2e-32 141.4 133 54.9
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 6.8e-32 141.0 133 54.9
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 1.2e-31 140.2 122 59.8
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 1.5e-31 139.8 122 59.8
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 2.0e-31 139.4 132 59.1
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 2.0e-31 139.4 127 65.4
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.6e-31 139.0 125 59.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 3.4e-31 138.7 132 58.3
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 3.4e-31 138.7 133 54.1
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 5.8e-31 137.9 130 59.2
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.8e-31 137.9 135 55.6
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.8e-31 137.9 132 58.3
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 5.8e-31 137.9 124 59.7
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 5.8e-31 137.9 139 58.3
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 7.5e-31 137.5 146 55.5
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 7.5e-31 137.5 128 60.9
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 9.8e-31 137.1 137 59.9
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 3.7e-30 135.2 135 54.1
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 3.7e-30 135.2 124 61.3
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 4.9e-30 134.8 135 57.0
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 4.9e-30 134.8 125 59.2
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 6.4e-30 134.4 120 56.7
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 6.4e-30 134.4 125 57.6
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 8.3e-30 134.0 122 61.5
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 8.3e-30 134.0 132 57.6
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 8.3e-30 134.0 138 58.7
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 1.1e-29 133.7 125 56.0
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 1.1e-29 133.7 138 57.2
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.1e-29 133.7 133 54.9
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 1.1e-29 133.7 133 55.6
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.9e-29 132.9 122 58.2
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.4e-29 132.5 133 52.6
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.4e-29 132.5 122 59.8
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.4e-29 132.5 122 59.8
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.2e-29 132.1 133 55.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 4.1e-29 131.7 133 54.1
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 5.4e-29 131.3 133 54.9
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 7.0e-29 131.0 120 57.5
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 7.0e-29 131.0 126 57.9
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 7.0e-29 131.0 128 54.7
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 9.2e-29 130.6 148 52.0
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.2e-28 130.2 132 55.3
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.6e-28 129.8 122 57.4
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.6e-28 129.8 125 57.6
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 2.0e-28 129.4 121 57.0
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 3.5e-28 128.6 148 51.4
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 5.0e-27 124.8 120 56.7
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 5.0e-27 124.8 142 54.2
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 5.6e-26 121.3 122 55.7
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 7.3e-26 120.9 120 55.8
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 7.3e-26 120.9 120 55.8
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 7.3e-26 120.9 120 55.8
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 2.1e-25 119.4 122 54.1
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 3.6e-25 118.6 144 50.0
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 6.2e-25 117.9 120 52.5
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 8.1e-25 117.5 124 54.0
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 1.1e-24 117.1 128 50.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.8e-24 116.3 133 48.9
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 8.9e-24 114.0 128 51.6
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 3.4e-23 112.1 133 48.9
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 5.8e-23 111.3 144 45.8
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.3e-22 110.2 131 50.4
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 1.7e-22 109.8 123 45.5
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 4.9e-22 108.2 115 50.4
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 8.3e-22 107.5 218 37.6
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 8.3e-22 107.5 121 49.6
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 2.1e-20 102.8 89 62.9
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.7e-19 99.8 110 51.8
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.7e-19 99.8 109 52.3
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 2.3e-19 99.4 130 49.2
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 1.1e-18 97.1 70 67.1
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.5e-18 95.9 110 50.0
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 2.5e-18 95.9 113 45.1
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 9.5e-18 94.0 224 33.9
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.2e-17 93.6 122 45.9
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 1.4e-16 90.1 119 46.2
TPR.G109 Trifolium pratense HOM05D003443 ORTHO05D008640 3.1e-16 89.0 51 92.2
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 3.1e-16 89.0 72 62.5
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.5e-15 86.7 124 47.6
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.0e-15 86.3 132 41.7
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 2.9e-14 82.4 121 38.0
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.4e-13 79.3 119 45.4
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 9.2e-13 77.4 76 59.2
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 6.2e-09 64.7 100 43.0
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 1.1e-08 63.9 122 34.4


User provided reference genes

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