Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g057715 Medicago truncatula HOM05D009185 ORTHO05D010768 3.8e-167 591.7 349 100.0
Medtr8g095235 Medicago truncatula HOM05D009185 ORTHO05D010768 3.0e-103 379.4 322 64.0
Medtr3g463110 Medicago truncatula HOM05D009185 ORTHO05D010768 1.5e-99 367.1 331 67.4
Medtr6g471190 Medicago truncatula HOM05D009185 ORTHO05D010768 5.6e-86 322.0 322 56.2
Medtr7g095830 Medicago truncatula HOM05D009185 ORTHO05D010768 3.3e-70 269.6 202 68.8
Medtr1g071170 Medicago truncatula HOM05D009185 ORTHO05D010768 4.9e-58 229.2 160 75.6
Medtr2g083745 Medicago truncatula HOM05D009185 ORTHO05D010768 7.1e-57 225.3 160 78.1
Medtr3g090200 Medicago truncatula HOM05D009185 ORTHO05D010768 2.1e-56 223.8 160 77.5
Medtr0389s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 2.2e-42 177.2 144 63.2
Medtr1g036650 Medicago truncatula HOM05D009185 ORTHO05D010768 2.7e-40 170.2 282 45.0
Medtr0014s0410 Medicago truncatula HOM05D009185 ORTHO05D010768 9.7e-38 161.8 156 56.4
Medtr4g033680 Medicago truncatula HOM05D009185 ORTHO05D010768 1.5e-35 154.5 211 49.3
Medtr7g034030 Medicago truncatula HOM05D009185 ORTHO05D010768 7.7e-35 152.1 155 54.8
Medtr0002s0070 Medicago truncatula HOM05D009185 ORTHO05D010768 7.4e-30 135.6 145 51.0
Medtr0157s0040 Medicago truncatula HOM05D009185 ORTHO05D010768 8.2e-29 132.1 186 40.9
Medtr6g015335 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-28 131.3 142 53.5
Medtr1g050415 Medicago truncatula HOM05D009185 ORTHO05D010768 2.6e-27 127.1 86 62.8
Medtr4g045717 Medicago truncatula HOM05D009185 ORTHO05D010768 1.7e-26 124.4 86 64.0
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 5.0e-26 122.9 145 48.3
Medtr0015s0170 Medicago truncatula HOM05D009185 ORTHO05D010768 8.5e-26 122.1 81 69.1
Medtr4g045943 Medicago truncatula HOM05D009185 ORTHO05D010768 5.5e-25 119.4 86 61.6
Medtr8g059190 Medicago truncatula HOM05D009185 ORTHO05D010768 9.4e-25 118.6 87 59.8
Medtr0389s0010 Medicago truncatula HOM05D009185 ORTHO05D010768 6.1e-24 115.9 73 90.4
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 8.0e-24 115.5 108 53.7
Medtr0001s0260 Medicago truncatula HOM05D009185 ORTHO05D010768 6.7e-23 112.5 83 62.7
Medtr3g090210 Medicago truncatula HOM05D009185 ORTHO05D010768 2.8e-21 107.1 65 73.8
Medtr3g040760 Medicago truncatula HOM05D009185 ORTHO05D010768 4.1e-20 103.2 100 49.0
Medtr0155s0050 Medicago truncatula HOM05D009185 ORTHO05D010768 7.0e-20 102.4 71 60.6
Medtr0362s0010 Medicago truncatula HOM05D009185 ORTHO05D010768 7.7e-19 99.0 155 39.4
Medtr0441s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 7.7e-19 99.0 65 70.8
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 2.7e-16 90.5 282 24.8
Medtr3g020105 Medicago truncatula HOM05D011496 ORTHO05D010768 4.7e-16 89.7 86 52.3
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 8.0e-16 89.0 86 52.3
Medtr0159s0060 Medicago truncatula HOM05D011496 ORTHO05D010768 4.0e-15 86.7 79 54.4
Medtr0260s0010 Medicago truncatula HOM05D011496 ORTHO05D000301 1.2e-14 85.1 82 53.7
TPR.G36275 Trifolium pratense HOM05D000047 ORTHO05D010768 1.5e-14 84.7 80 42.5
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 2.8e-13 80.5 81 37.0
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 2.8e-13 80.5 82 39.0
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 6.3e-13 79.3 79 43.0
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 6.3e-13 79.3 78 39.7
Medtr2g064025 Medicago truncatula HOM05D011496 ORTHO05D010768 8.3e-13 79.0 79 49.4
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 3.1e-12 77.0 285 24.9
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 3.1e-12 77.0 285 24.9
Medtr2g076103 Medicago truncatula HOM05D011496 ORTHO05D010768 3.1e-12 77.0 79 49.4
Medtr3g048545 Medicago truncatula HOM05D011496 ORTHO05D010768 7.0e-12 75.9 79 48.1
Medtr7g081462 Medicago truncatula HOM05D011496 ORTHO05D010768 7.0e-12 75.9 79 48.1
TPR.G36848 Trifolium pratense HOM05D000047 ORTHO05D000589 7.0e-12 75.9 79 38.0
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 2.0e-11 74.3 79 36.7
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.7e-11 73.9 86 38.4
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 2.7e-11 73.9 363 22.0
Medtr2g037220 Medicago truncatula HOM05D011496 ORTHO05D010768 4.5e-11 73.2 79 46.8
TPR.G16375 Trifolium pratense HOM05D009185 ORTHO05D010768 5.9e-11 72.8 79 34.2
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 5.9e-11 72.8 81 35.8
Medtr0005s0250 Medicago truncatula HOM05D009185 ORTHO05D010768 1.3e-10 71.6 56 51.8
Medtr6g464470 Medicago truncatula HOM05D002881 ORTHO05D002983 1.7e-10 71.2 89 47.2
Medtr4g058030 Medicago truncatula HOM05D009185 ORTHO05D010768 2.3e-10 70.9 35 100.0
TPR.G18503 Trifolium pratense HOM05D009185 ORTHO05D010768 2.9e-10 70.5 80 37.5
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-10 70.5 113 32.7
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.6e-10 68.9 80 38.8
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 8.6e-10 68.9 130 42.3
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 1.1e-09 68.6 89 37.1
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 3.3e-09 67.0 108 34.3
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 3.3e-09 67.0 201 25.4
Medtr0600s0020 Medicago truncatula HOM05D008900 ORTHO05D010768 4.2e-09 66.6 49 61.2
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 4.2e-09 66.6 79 36.7
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 9.5e-09 65.5 209 25.4
PGR083G0665 Punica granatum HOM05D000047 ORTHO05D000589 9.5e-09 65.5 90 34.4
PGSC0003DMG400038435 Solanum tuberosum HOM05D000047 ORTHO05D000589 9.5e-09 65.5 252 22.2
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 1.6e-08 64.7 77 35.1
Actinidia34833 Actinidia chinensis HOM05D064681 ORTHO05D023234 2.8e-08 63.9 89 33.7
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 2.8e-08 63.9 64 51.6
TAR697G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000589 2.8e-08 63.9 75 40.0
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 6.1e-08 62.8 82 36.6
AUR62036961 Chenopodium quinoa HOM05D009273 ORTHO05D000589 8.0e-08 62.4 110 31.8
Medtr3g069345 Medicago truncatula HOM05D011496 ORTHO05D010768 1.4e-07 61.6 51 58.8
MBI05_g05358_MAGBIO Magnolia biondii HOM05D057483 ORTHO05D023234 1.8e-07 61.2 175 25.7
MBI18_g24630_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.8e-07 61.2 68 44.1
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 1.8e-07 61.2 82 37.8
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 4.0e-07 60.1 153 28.8
PGSC0003DMG400042281 Solanum tuberosum HOM05D000047 ORTHO05D000589 4.0e-07 60.1 231 23.4
AUR62037095 Chenopodium quinoa HOM05D009273 ORTHO05D011122 5.2e-07 59.7 110 30.9
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 5.2e-07 59.7 79 34.2
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 5.2e-07 59.7 83 32.5
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 5.2e-07 59.7 76 32.9
AUR62025784 Chenopodium quinoa HOM05D010410 ORTHO05D011122 8.9e-07 58.9 76 39.5
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.0e-06 57.8 77 35.1
PGR083G2666 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-06 57.8 85 36.5
CAN.G370.4 Capsicum annuum HOM05D000047 ORTHO05D000589 2.6e-06 57.4 91 31.9
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.6e-06 57.4 76 39.5
PGR031G2581 Punica granatum HOM05D000047 ORTHO05D000589 2.6e-06 57.4 84 34.5
PGR142G3120 Punica granatum HOM05D000047 ORTHO05D000589 2.6e-06 57.4 83 34.9
PGR042G1707 Punica granatum HOM05D000047 ORTHO05D000589 3.4e-06 57.0 135 29.6
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 3.4e-06 57.0 95 28.4
MBI17_g23155_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 4.4e-06 56.6 68 41.2
AUR62042427 Chenopodium quinoa HOM05D009273 ORTHO05D011122 5.7e-06 56.2 67 43.3
PGR102G0468 Punica granatum HOM05D000047 ORTHO05D000589 5.7e-06 56.2 83 34.9
TPR.G14983 Trifolium pratense HOM05D011496 ORTHO05D000589 5.7e-06 56.2 60 36.7
Dinv04833 Davidia involucrata HOM05D013497 ORTHO05D008628 7.5e-06 55.8 62 37.1
Sopen03g006490 Solanum pennellii HOM05D000047 ORTHO05D000589 7.5e-06 55.8 50 46.0
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 7.5e-06 55.8 113 32.7
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 7.5e-06 55.8 70 37.1
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 9.8e-06 55.5 70 38.6
PGR083G2337 Punica granatum HOM05D000047 ORTHO05D007790 9.8e-06 55.5 83 33.7
PGR102G2315 Punica granatum HOM05D000047 ORTHO05D007790 9.8e-06 55.5 116 29.3


User provided reference genes

Program Settings