Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 4.8e-135 484.6 259 100.0
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 1.0e-55 221.1 246 50.8
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 7.9e-53 211.5 263 46.4
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 2.0e-51 206.8 146 66.4
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-47 194.1 140 65.0
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 4.7e-45 185.7 144 59.7
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 7.9e-45 184.9 152 60.5
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 3.7e-42 176.0 219 45.2
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 8.2e-42 174.9 231 47.6
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 2.4e-41 173.3 225 41.8
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 3.1e-41 172.9 130 58.5
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 3.6e-37 159.5 142 56.3
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-32 142.9 242 36.0
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.0e-31 141.4 246 36.6
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.7e-31 140.6 246 36.6
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 2.2e-31 140.2 217 47.0
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 1.1e-30 137.9 237 35.0
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 1.9e-30 137.1 224 37.1
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 3.2e-30 136.3 218 36.7
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 3.2e-30 136.3 164 44.5
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-28 131.0 158 46.2
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-28 131.0 158 46.2
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 1.8e-28 130.6 200 47.5
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 4.0e-28 129.4 229 36.2
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 8.8e-28 128.3 164 39.6
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 5.7e-27 125.6 111 56.8
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-27 125.2 136 47.1
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 9.7e-27 124.8 136 45.6
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.7e-26 124.0 166 41.0
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.2e-26 123.6 154 40.3
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-26 121.7 148 41.9
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-25 121.3 148 41.2
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-25 120.9 126 43.7
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-25 120.9 224 36.2
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.4e-25 120.9 232 33.6
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-25 120.6 209 34.9
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.4e-25 120.2 213 33.8
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-25 119.8 219 34.2
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-25 119.4 232 33.6
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.3e-25 119.0 222 36.9
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 5.3e-25 119.0 113 46.9
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.0e-25 118.6 232 33.2
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-24 117.5 148 40.5
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 2.7e-24 116.7 157 38.9
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-24 116.7 148 39.9
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-24 116.7 156 41.0
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 2.7e-24 116.7 82 62.2
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.5e-24 116.3 157 38.9
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-24 116.3 156 41.0
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 4.5e-24 115.9 127 45.7
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 7.7e-24 115.2 156 40.4
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-23 114.8 140 41.4
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 1.3e-23 114.4 127 39.4
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 1.3e-23 114.4 112 45.5
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 114.4 143 42.0
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 114.4 157 40.1
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 114.4 156 40.4
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 114.4 156 40.4
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-23 114.0 156 40.4
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-23 113.6 148 38.5
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-23 112.8 156 40.4
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.5e-23 112.1 232 31.9
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-23 111.7 143 39.2
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-22 111.3 130 40.0
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-22 110.9 237 32.9
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-22 110.5 149 36.9
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-22 110.5 137 40.1
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.5e-22 110.2 125 40.8
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-22 110.2 221 34.8
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 4.2e-22 109.4 143 39.2
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 7.2e-22 108.6 154 39.6
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 9.4e-22 108.2 156 39.7
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 9.4e-22 108.2 141 41.8
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 9.4e-22 108.2 99 48.5
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 9.4e-22 108.2 99 48.5
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-21 107.8 163 36.2
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-21 107.8 143 38.5
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 4.7e-21 105.9 109 45.0
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 6.1e-21 105.5 146 37.0
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-20 104.8 143 37.8
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-20 104.4 162 38.3
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-20 104.0 149 36.2
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-20 104.0 124 40.3
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-20 103.2 128 41.4
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 4.0e-20 102.8 150 35.3
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.0e-20 102.8 117 41.9
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 4.0e-20 102.8 200 32.5
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 5.2e-20 102.4 200 32.5
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.8e-20 102.1 153 39.9
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 8.8e-20 101.7 124 40.3
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-19 101.3 128 38.3
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-19 101.3 151 37.1
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 1.5e-19 100.9 132 38.6
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-19 100.1 123 39.0
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-19 99.8 114 41.2
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 7.5e-19 98.6 150 36.7
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-18 97.8 143 36.4
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 2.2e-18 97.1 59 67.8
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.8e-18 96.7 153 37.3
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-18 95.1 131 37.4
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-17 94.7 167 37.7
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 1.8e-17 94.0 222 30.2
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 1.8e-17 94.0 54 74.1
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-17 93.6 111 45.0
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 3.1e-17 93.2 102 41.2
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 4.1e-17 92.8 224 27.7
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-17 92.4 94 46.8
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 9.1e-17 91.7 95 46.3
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-16 90.9 119 38.7
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 5.9e-16 89.0 144 36.1
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 7.7e-16 88.6 128 38.3
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-15 87.4 138 35.5
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 1.7e-15 87.4 115 40.0
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 3.8e-15 86.3 118 38.1
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-15 85.5 139 36.0
AUR62018245 Chenopodium quinoa HOM05D002760 ORTHO05D003169 8.6e-15 85.1 111 46.8
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-14 84.7 105 40.0
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 5.5e-14 82.4 78 47.4
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 5.5e-14 82.4 96 41.7
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-12 77.0 75 45.3
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-12 75.5 74 44.6
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.0e-11 73.9 71 43.7
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.4e-11 72.8 169 30.8
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.7e-11 72.4 168 30.4
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 9.8e-11 71.6 61 50.8
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 6.3e-10 68.9 62 48.4
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 3.2e-09 66.6 59 49.2
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 9.2e-09 65.1 61 45.9
Medtr7g063340 Medicago truncatula HOM05D001338 ORTHO05D001239 5.9e-08 62.4 50 62.0
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 5.9e-08 62.4 61 44.3
Oeu020403.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-07 61.6 61 45.9
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-07 60.8 58 46.6
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-07 60.1 94 34.0
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-07 60.1 117 34.2
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-06 58.2 150 28.7
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 2.5e-06 57.0 128 31.2
EL10Ac7g17250 Beta vulgaris HOM05D001338 ORTHO05D001239 4.3e-06 56.2 37 62.2
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 4.3e-06 56.2 87 36.8
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 7.3e-06 55.5 82 35.4
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 7.3e-06 55.5 218 24.3


User provided reference genes

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