Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g053460 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-113 412.9 193 100.0
Medtr5g014380 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-30 137.5 182 41.2
Medtr6g084160 Medicago truncatula HOM05D002545 ORTHO05D002335 5.6e-27 125.2 182 41.2
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 2.3e-25 119.8 181 37.0
Medtr6g044010 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-24 117.1 118 46.6
Medtr1g046260 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-22 110.9 112 47.3
Medtr7g033295 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-22 110.9 112 41.1
TPR.G37514 Trifolium pratense HOM05D002545 ORTHO05D002335 7.0e-22 108.2 192 34.9
Medtr4g061240 Medicago truncatula HOM05D002545 ORTHO05D002335 9.2e-22 107.8 102 44.1
Medtr7g102890 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-21 106.3 180 33.9
Medtr7g109880 Medicago truncatula HOM05D002545 ORTHO05D002335 3.5e-21 105.9 109 42.2
Medtr3g065700 Medicago truncatula HOM05D002545 ORTHO05D002335 6.0e-21 105.1 99 47.5
Medtr8g024270 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-20 103.2 102 43.1
Medtr8g037820 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-20 103.2 138 38.4
Medtr4g036525 Medicago truncatula HOM05D002545 ORTHO05D002335 5.0e-20 102.1 95 46.3
Medtr3g052690 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-19 99.4 102 43.1
Medtr5g080210 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-19 99.0 114 38.6
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 9.5e-19 97.8 97 46.4
Medtr2g095160 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-18 96.7 117 37.6
Medtr0181s0040 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-17 94.4 155 35.5
Medtr5g036930 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-17 94.4 64 60.9
Medtr3g464640 Medicago truncatula HOM05D002545 ORTHO05D002335 8.9e-17 91.3 102 36.3
Medtr4g054990 Medicago truncatula HOM05D002545 ORTHO05D002335 3.4e-16 89.4 101 41.6
Medtr5g054960 Medicago truncatula HOM05D002545 ORTHO05D002335 3.4e-16 89.4 102 38.2
Medtr7g013900 Medicago truncatula HOM05D002545 ORTHO05D002335 5.8e-16 88.6 69 59.4
Medtr4g097730 Medicago truncatula HOM05D002545 ORTHO05D002335 9.8e-16 87.8 102 36.3
TPR.G33155 Trifolium pratense HOM05D002545 ORTHO05D002335 1.1e-14 84.3 98 37.8
Medtr4g033220 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-14 84.0 110 40.0
TPR.G13582 Trifolium pratense HOM05D000003 ORTHO05D002335 1.9e-14 83.6 107 33.6
Medtr8g058405 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-14 82.8 49 73.5
Medtr8g078210 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-14 82.8 75 46.7
Medtr7g052100 Medicago truncatula HOM05D002545 ORTHO05D002335 7.1e-14 81.6 102 35.3
Medtr5g054985 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-13 80.5 98 37.8
Medtr1g055370 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-13 80.1 58 53.4
Medtr5g056220 Medicago truncatula HOM05D002545 ORTHO05D002335 3.5e-13 79.3 52 65.4
TPR.G27728 Trifolium pratense HOM05D000003 ORTHO05D002335 4.6e-13 79.0 167 27.5
TPR.G35310 Trifolium pratense HOM05D002545 ORTHO05D002335 7.8e-13 78.2 98 33.7
Medtr2g104350 Medicago truncatula HOM05D002545 ORTHO05D002335 1.0e-12 77.8 89 37.1
Medtr5g041190 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-12 77.4 135 34.1
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 2.3e-12 76.6 102 30.4
Medtr5g023990 Medicago truncatula HOM05D000208 ORTHO05D266637 3.0e-12 76.3 57 56.1
Medtr5g038480 Medicago truncatula HOM05D002545 ORTHO05D002335 5.1e-12 75.5 80 43.8
TPR.G39171 Trifolium pratense HOM05D002545 ORTHO05D002335 5.1e-12 75.5 89 38.2
ECA246G5162 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.6e-12 75.1 115 34.8
Medtr3g069400 Medicago truncatula HOM05D002545 ORTHO05D002335 6.6e-12 75.1 69 42.0
Medtr0080s0060 Medicago truncatula HOM05D008853 ORTHO05D000224 1.9e-11 73.6 64 60.9
Medtr6g034085 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-11 73.6 49 63.3
TPR.G5246 Trifolium pratense HOM05D002545 ORTHO05D002335 1.9e-11 73.6 100 34.0
TPR.G14763 Trifolium pratense HOM05D015915 ORTHO05D017839 2.5e-11 73.2 101 31.7
Medtr4g051010 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-11 72.4 151 31.8
Medtr2g031500 Medicago truncatula HOM05D002545 ORTHO05D002335 7.3e-11 71.6 76 46.1
Lalb_Chr18g0059261 Lupinus albus HOM05D011108 ORTHO05D002335 9.5e-11 71.2 184 26.6
TPR.G37075 Trifolium pratense HOM05D000003 ORTHO05D002335 9.5e-11 71.2 115 33.0
Medtr2g062550 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-10 69.7 58 48.3
Medtr4g122170 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-10 69.7 84 38.1
Medtr6g016340 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-10 69.7 77 40.3
Medtr3g017430 Medicago truncatula HOM05D002545 ORTHO05D002335 4.7e-10 68.9 59 45.8
TPR.G40225 Trifolium pratense HOM05D000003 ORTHO05D000004 4.7e-10 68.9 115 29.6
Medtr2g040320 Medicago truncatula HOM05D002545 ORTHO05D002335 6.2e-10 68.6 74 43.2
Medtr8g058915 Medicago truncatula HOM05D038936 ORTHO05D260101 6.2e-10 68.6 32 96.9
TPR.G14179 Trifolium pratense HOM05D002545 ORTHO05D002335 6.2e-10 68.6 114 28.1
TPR.G32089 Trifolium pratense HOM05D000003 ORTHO05D000004 6.2e-10 68.6 95 31.6
ECA232G4857 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.1e-10 68.2 100 37.0
TPR.G1298 Trifolium pratense HOM05D002545 ORTHO05D002335 1.1e-09 67.8 102 28.4
Medtr7g105480 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-09 67.4 46 56.5
TPR.G32261 Trifolium pratense HOM05D002545 ORTHO05D002335 1.8e-09 67.0 100 36.0
Medtr2g077630 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-09 65.9 111 34.2
TPR.G18916 Trifolium pratense HOM05D002545 ORTHO05D002335 4.0e-09 65.9 99 31.3
ECA246G1543 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.2e-09 65.5 104 31.7
Medtr3g112330 Medicago truncatula HOM05D000003 ORTHO05D002335 6.8e-09 65.1 90 35.6
Medtr5g061110 Medicago truncatula HOM05D002545 ORTHO05D002335 6.8e-09 65.1 52 55.8
TPR.G36309 Trifolium pratense HOM05D002545 ORTHO05D002335 6.8e-09 65.1 71 42.3
ECA246G3864 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.9e-09 64.7 103 31.1
TPR.G16000 Trifolium pratense HOM05D002545 ORTHO05D002335 8.9e-09 64.7 99 26.3
Medtr1g072480 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-08 63.9 69 39.1
TPR.G25559 Trifolium pratense HOM05D002545 ORTHO05D002335 2.0e-08 63.5 93 32.3
TPR.G29823 Trifolium pratense HOM05D000003 ORTHO05D002335 2.6e-08 63.2 98 33.7
PSO017G0030 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-08 62.8 119 29.4
Medtr5g025040 Medicago truncatula HOM05D002545 ORTHO05D002335 4.4e-08 62.4 96 35.4
HanXRQChr03g0071601 Helianthus annuus HOM05D000003 ORTHO05D000004 7.6e-08 61.6 105 26.7
Medtr8g074940 Medicago truncatula HOM05D002545 ORTHO05D002335 7.6e-08 61.6 74 33.8
Medtr8g077330 Medicago truncatula HOM05D000003 ORTHO05D002335 7.6e-08 61.6 107 29.9
ECA236G0216 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.9e-08 61.2 103 28.2
Medtr3g068165 Medicago truncatula HOM05D002545 ORTHO05D002335 9.9e-08 61.2 97 32.0
Medtr5g007390 Medicago truncatula HOM05D000003 ORTHO05D002335 9.9e-08 61.2 95 29.5
Medtr5g020880 Medicago truncatula HOM05D002545 ORTHO05D002335 9.9e-08 61.2 52 51.9
PSO017G0891 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 60.8 105 34.3
TPR.G10611 Trifolium pratense HOM05D001713 ORTHO05D001669 1.3e-07 60.8 104 28.8
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 1.7e-07 60.5 103 27.2
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 1.7e-07 60.5 103 27.2
PSO384G2309 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-07 60.5 113 31.9
Psat0s4795g0040 Pisum sativum HOM05D000003 ORTHO05D000004 1.7e-07 60.5 85 35.3
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-07 60.1 106 27.4
TPR.G7283 Trifolium pratense HOM05D002545 ORTHO05D002335 2.2e-07 60.1 133 33.1
ECA246G4424 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-07 59.7 172 28.5
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 111 31.5
PSO478G4306 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 106 30.2
TPR.G31639 Trifolium pratense HOM05D000003 ORTHO05D002335 2.9e-07 59.7 118 33.1
Medtr5g012450 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-07 59.3 53 45.3
Medtr8g006020 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-07 59.3 73 38.4
PSO675G5675 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-07 59.3 181 24.9
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-07 58.5 96 31.2
Aqoxy6G02493 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-07 58.5 93 31.2
Aqoxy6G02512 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-07 58.5 93 31.2
ECA232G4463 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-07 58.5 89 31.5
ECA247G0930 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-07 58.5 108 30.6
Medtr7g103360 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-07 58.5 74 36.5
PSO170G3995 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-07 58.2 113 31.9
Medtr1g018300 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.4 54 44.4
PSO170G5621 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-06 57.4 111 34.2
TPR.G9826 Trifolium pratense HOM05D002545 ORTHO05D002335 1.4e-06 57.4 82 32.9
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 1.9e-06 57.0 114 27.2
Medtr1g015073 Medicago truncatula HOM05D000003 ORTHO05D002335 1.9e-06 57.0 89 31.5
Medtr2g076890 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-06 57.0 73 38.4
PSO357G0590 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 109 30.3
TWI12G0915 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-06 57.0 104 31.7
ECA232G3635 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 56.6 96 28.1
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 2.4e-06 56.6 101 27.7
Aqoxy1G02855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.2e-06 56.2 98 31.6
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 3.2e-06 56.2 95 30.5
PSO017G0975 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 132 29.5
PSO832G4523 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 125 28.0
Medtr7g027170 Medicago truncatula HOM05D002545 ORTHO05D002335 4.1e-06 55.8 57 42.1
Medtr5g048020 Medicago truncatula HOM05D000003 ORTHO05D002335 5.4e-06 55.5 96 29.2
Medtr5g068470 Medicago truncatula HOM05D002545 ORTHO05D002335 5.4e-06 55.5 57 45.6
LjContig00155g0012392 Lotus japonicus HOM05D002777 ORTHO05D001516 7.1e-06 55.1 101 29.7
PSO017G0311 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 99 32.3
PSO017G3724 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 92 28.3
PSO421G0296 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 99 30.3
PSO832G2731 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 99 30.3
Lalb_Chr12g0196281 Lupinus albus HOM05D011108 ORTHO05D010885 9.2e-06 54.7 95 28.4
Medtr8g079570 Medicago truncatula HOM05D002545 ORTHO05D002335 9.2e-06 54.7 63 41.3


User provided reference genes

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