Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 3.5e-138 495.0 254 100.0
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 3.5e-138 495.0 254 100.0
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 2.8e-103 379.0 257 78.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 1.0e-84 317.4 246 70.3
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 5.7e-80 301.6 256 64.1
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 6.3e-79 298.1 259 66.4
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.9e-76 289.3 256 62.9
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.5e-75 287.0 259 64.5
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.3e-68 263.8 268 57.8
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 7.3e-59 231.5 271 50.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 6.1e-58 228.4 258 52.3
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.0e-57 227.6 234 54.3
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.0e-57 226.1 267 49.1
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.0e-57 226.1 271 49.4
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 4.0e-57 225.7 267 49.4
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 4.0e-57 225.7 271 49.4
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 2.0e-56 223.4 271 48.3
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 4.4e-56 222.2 271 48.0
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 5.7e-56 221.9 223 55.6
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 5.7e-56 221.9 273 48.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 9.8e-56 221.1 271 46.9
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 9.8e-56 221.1 264 48.5
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.7e-55 220.3 268 49.3
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.7e-55 220.3 235 51.5
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.7e-55 220.3 259 50.2
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.7e-55 220.3 271 48.3
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.9e-55 219.5 278 48.2
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 2.9e-55 219.5 272 47.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.7e-55 219.2 235 52.3
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.7e-55 219.2 272 48.9
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 4.9e-55 218.8 271 47.6
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 6.4e-55 218.4 263 46.0
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 6.4e-55 218.4 265 49.8
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 8.3e-55 218.0 264 47.0
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 8.3e-55 218.0 264 47.0
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.1e-54 217.6 272 49.6
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.4e-54 217.2 269 50.6
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.4e-54 217.2 235 50.2
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 2.4e-54 216.5 267 47.9
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.4e-54 216.5 272 48.2
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 3.2e-54 216.1 270 46.7
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 4.1e-54 215.7 265 49.8
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 4.1e-54 215.7 271 46.9
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 7.0e-54 214.9 267 46.8
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.2e-53 214.2 236 51.3
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.6e-53 213.8 236 51.7
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.0e-53 213.4 274 46.4
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 2.0e-53 213.4 268 49.3
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 2.0e-53 213.4 268 49.3
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 4.6e-53 212.2 235 50.6
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 4.6e-53 212.2 268 46.3
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.3e-52 209.9 268 47.0
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 5.0e-52 208.8 271 45.4
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.1e-51 207.6 269 46.5
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 1.1e-51 207.6 243 51.9
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.1e-51 207.6 268 46.6
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 2.5e-51 206.5 271 45.8
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.3e-51 205.7 272 45.6
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 2.1e-50 203.4 252 48.0
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.8e-50 203.0 272 45.6
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 3.6e-50 202.6 269 47.6
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 6.2e-50 201.8 272 45.2
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-49 200.7 271 46.1
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-49 200.7 271 46.1
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.4e-49 200.7 268 45.5
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.8e-49 200.3 273 45.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.8e-49 200.3 273 45.8
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.8e-49 200.3 254 46.5
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 5.2e-49 198.7 253 47.4
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 6.8e-49 198.4 267 44.6
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.5e-48 197.2 272 44.1
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 2.6e-48 196.4 266 44.0
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 4.4e-48 195.7 233 48.1
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 4.4e-48 195.7 265 45.7
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 5.8e-48 195.3 246 46.3
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 5.8e-48 195.3 234 49.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-48 194.9 271 43.9
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 7.5e-48 194.9 233 50.2
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 9.8e-48 194.5 116 83.6
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.2e-47 193.4 234 47.4
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 3.7e-47 192.6 233 50.2
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 6.4e-47 191.8 239 46.4
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 8.3e-47 191.4 271 43.2
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 8.3e-47 191.4 271 43.2
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.1e-46 191.0 234 48.7
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.1e-46 191.0 270 44.4
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.9e-46 190.3 239 46.4
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 2.4e-46 189.9 269 43.1
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 2.4e-46 189.9 269 43.5
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 4.1e-46 189.1 274 42.7
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 5.4e-46 188.7 244 47.5
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 1.0e-44 184.5 216 48.1
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 5.6e-43 178.7 231 44.2
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.2e-42 177.6 253 45.1
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 4.7e-42 175.6 272 43.0
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.1e-41 174.5 272 42.6
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.2e-39 166.8 231 44.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 8.3e-39 164.9 214 44.9
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 8.6e-36 154.8 84 91.7
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 1.5e-35 154.1 245 44.5
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 2.5e-35 153.3 202 47.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.6e-34 149.4 260 37.3
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.6e-32 143.3 207 44.4
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.3e-31 141.0 268 35.1
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.7e-31 140.6 239 41.4
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 1.1e-30 137.9 211 43.1
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.4e-30 136.7 222 40.1
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 5.6e-27 125.6 208 41.3
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-26 124.0 190 39.5
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 8.1e-26 121.7 190 38.4
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.6e-21 107.5 238 32.8
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 8.7e-20 101.7 146 39.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.8e-17 94.0 221 31.2
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 5.8e-16 89.0 283 29.7
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.2e-15 87.0 84 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 6.4e-15 85.5 222 32.4
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.4e-14 82.4 104 46.2
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 5.6e-11 72.4 47 66.0
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 6.9e-09 65.5 105 40.0


User provided reference genes

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